Active Inference · Paper · 2025

Thoughtseeds: A Hierarchical and Agentic Framework for Investigating Thought Dynamics in Meditative States

Prakash Chandra Kavi, Gorka Zamora-López, Daniel Ari Friedman, Gustavo Patow

Entropy

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Overview

Thoughtseeds presents a hierarchical and agentic framework for investigating thought dynamics in meditative states. The framework models thoughts as self-organizing agents (thoughtseeds) that compete and cooperate within a cognitive landscape, using Active Inference to formalize the dynamics of attention, awareness, and thought emergence during meditation.

Thoughtseedsmeditationthought dynamicshierarchical modelingagentic frameworkActive Inferenceattentionmindfulness

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Methods and contributions

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Findings and contributions

  • Four meditation states (breath_control, mind_wandering, meta_awareness, redirect_breath) emerge from thoughtseed interactions rather than being hard-coded.
  • Simulated experts sustain control dominance of focused attention, whereas novices show more frequent, prolonged mind_wandering episodes.
  • Learned weights show stronger breath_focus activation during breath_control in experts (0.98) than novices (0.78).
  • In the interaction network, experts show strong facilitation from breath focus to self-reflection, absent in novices.
  • The authors note the model is not a comprehensive theory of consciousness and needs validation against real neuroimaging or behavioral datasets.

Methods

  • Three-level agent-based model of focused-attention Vipassana meditation — Levels are knowledge domains, a Thoughtseed Network of five competing thoughtseeds, and a meta-cognition layer regulating state transitions.
  • Novice and expert state-transition matrices drawn from prior empirical research — Reference transition probabilities among four meditation states for experts and novices were derived from published focused-attention research.
  • Rule-based hybrid learning of attractor weight matrices — Rule-based constraints optimize thoughtseed weights and interaction patterns, avoiding manual parameter tuning.
  • Granger causality extraction of thoughtseed interaction network — Pairwise Granger tests (max lag five timesteps, chi-squared significance) define directional thoughtseed influences, then scaled and thresholded.
  • Modified Wilson-Cowan network dynamics with winner-takes-all dominance — Competing thoughtseed populations are simulated with facilitatory/inhibitory connections and top-down meta-awareness; the most active thoughtseed dominates each timestep.

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Citation

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Kavi, Prakash Chandra; Zamora-López, Gorka; Friedman, Daniel Ari; Patow, Gustavo. 2025. Thoughtseeds: A Hierarchical and Agentic Framework for Investigating Thought Dynamics in Meditative States. Entropy. DOI: 10.3390/e27050459. URL: https://doi.org/10.3390/e27050459.
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Catalog details and resources

Catalog row27
Citation keyFriedman2025ThoughtseedsHierarchicalAgenticFramework027
Platform availability
  • ⬜ Zenodo
  • ⬜ GitHub
  • ⬜ arXiv
  • ⬜ OSF
  • ⬜ HuggingFace
  • ⬜ Software Heritage
  • ⬜ PyPI
  • ✅ Full documentation

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