{
  "schema_version": "1.4",
  "generated_at": "2026-08-13T17:52:47+00:00",
  "canonical_origin": "https://danielarifriedman.com/",
  "canonical_sources": {
    "bibliography": "/pages/BIBLIOGRAPHY.md",
    "software": "/pages/SOFTWARE.md",
    "claims": "/data/claims.json",
    "counts": "/data/current-counts.json",
    "verification": "/pages/VERIFICATION_LOG.md",
    "backlog": "/TODO.md",
    "coverage_exceptions": "/data/coverage-exceptions.json",
    "repository_classification": "/data/repository-classification.json",
    "repository_exclusions": "/data/repository-exclusions.json",
    "release_integrity": "/data/release-integrity.json"
  },
  "routes": [
    {
      "id": "home",
      "path": "/",
      "format": "text/html",
      "kind": "profile"
    },
    {
      "id": "publications",
      "path": "/publications.html",
      "format": "text/html",
      "kind": "collection"
    },
    {
      "id": "works",
      "path": "/works/",
      "format": "text/html",
      "kind": "collection"
    },
    {
      "id": "domains",
      "path": "/domains.html",
      "format": "text/html",
      "kind": "taxonomy"
    },
    {
      "id": "software",
      "path": "/software.html",
      "format": "text/html",
      "kind": "collection"
    },
    {
      "id": "repositories",
      "path": "/repositories.html",
      "format": "text/html",
      "kind": "collection"
    },
    {
      "id": "art",
      "path": "/art.html",
      "format": "text/html",
      "kind": "collection"
    },
    {
      "id": "videos",
      "path": "/videos.html",
      "format": "text/html",
      "kind": "collection"
    },
    {
      "id": "search",
      "path": "/search.html",
      "format": "text/html",
      "kind": "query",
      "query": "?q={terms}"
    },
    {
      "id": "discovery",
      "path": "/discovery.html",
      "format": "text/html",
      "kind": "source-map"
    },
    {
      "id": "catalog",
      "path": "/catalog.html",
      "format": "text/html",
      "kind": "data-catalog"
    },
    {
      "id": "exports",
      "path": "/exports.html",
      "format": "text/html",
      "kind": "export-hub"
    },
    {
      "id": "evidence",
      "path": "/evidence.html",
      "format": "text/html",
      "kind": "evidence-ledger"
    },
    {
      "id": "updates",
      "path": "/updates.html",
      "format": "text/html",
      "kind": "changelog"
    },
    {
      "id": "cv",
      "path": "/resume/resume.html",
      "format": "text/html",
      "kind": "accessible-cv"
    },
    {
      "id": "agent-index",
      "path": "/data/agent-index.json",
      "format": "application/json",
      "kind": "route-manifest"
    }
  ],
  "datasets": {
    "works": {
      "path": "/data/works.json",
      "count": 208,
      "schema": "Work"
    },
    "software": {
      "path": "/data/software.json",
      "count": 146,
      "schema": "SoftwareRepository"
    },
    "repositories": {
      "path": "/data/github-repositories.json",
      "count": 244,
      "schema": "Repository"
    },
    "artworks": {
      "path": "/data/artworks.json",
      "count": 942,
      "schema": "VisualArtwork"
    },
    "artworks_index": {
      "path": "/data/artworks-index.json",
      "count": 942,
      "schema": "ArtworkIndex"
    },
    "videos": {
      "path": "/data/videos.json",
      "count": 1127,
      "schema": "VideoObject"
    },
    "videos_index": {
      "path": "/data/videos-index.json",
      "count": 1127,
      "schema": "VideoIndex"
    },
    "search": {
      "path": "/search-index.json",
      "count": null,
      "schema": "SearchResult"
    },
    "claims": {
      "path": "/data/claims.json",
      "count": null,
      "schema": "ClaimWithEvidence"
    },
    "coverage_exceptions": {
      "path": "/data/coverage-exceptions.json",
      "count": 54,
      "schema": "CoverageException"
    },
    "repository_classification": {
      "path": "/data/repository-classification.json",
      "count": 101,
      "schema": "RepositoryClassification"
    },
    "pages_artifact": {
      "path": "/data/pages-artifact-manifest.json",
      "count": null,
      "schema": "PagesArtifactManifest"
    },
    "release_integrity": {
      "path": "/data/release-integrity.json",
      "count": null,
      "schema": "ReleaseIntegrity"
    },
    "people": {
      "path": "/data/people.json",
      "count": 5,
      "schema": "Person"
    },
    "organizations": {
      "path": "/data/organizations.json",
      "count": 4,
      "schema": "Organization"
    },
    "resume": {
      "path": "/data/resume.json",
      "count": null,
      "schema": "ResumeData"
    },
    "work_enrichment": {
      "path": "/data/work-enrichment.json",
      "count": 208,
      "schema": "WorkEnrichment"
    },
    "catalog": {
      "path": "/data/catalog.json",
      "count": 29,
      "schema": "DataCatalog"
    },
    "reconciliation": {
      "path": "/data/reconciliation.json",
      "count": 6,
      "schema": "ReconciliationReport"
    },
    "generated_manifest": {
      "path": "/data/generated-manifest.json",
      "count": 49,
      "schema": "GeneratedManifest"
    }
  },
  "reports": [
    {
      "id": "current-counts",
      "path": "/data/current-counts.json",
      "format": "application/json",
      "schema": "GeneratedReport",
      "freshness_field": "generated_at"
    },
    {
      "id": "public-source-snapshot",
      "path": "/reports/public_source_snapshot_2026-07-21.json",
      "format": "application/json",
      "schema": "GeneratedReport",
      "freshness_field": "generated_at"
    },
    {
      "id": "public-source-inventory",
      "path": "/reports/public_source_inventory_2026-08-10.json",
      "format": "application/json",
      "schema": "GeneratedReport",
      "freshness_field": "generated_at"
    },
    {
      "id": "paired-publications",
      "path": "/reports/paired_publications_2026-08-10.json",
      "format": "application/json",
      "schema": "GeneratedReport",
      "freshness_field": "generated_at"
    },
    {
      "id": "accessibility",
      "path": "/reports/accessibility_static_2026-08-14.json",
      "format": "application/json",
      "schema": "GeneratedReport",
      "freshness_field": "generated_at"
    },
    {
      "id": "asset-size",
      "path": "/reports/asset_size_2026-08-14.json",
      "format": "application/json",
      "schema": "GeneratedReport",
      "freshness_field": "generated_at"
    },
    {
      "id": "live-site",
      "path": "/reports/live_site_verification_2026-08-13.json",
      "format": "application/json",
      "schema": "GeneratedReport",
      "freshness_field": "generated_at"
    }
  ],
  "schemas": {
    "Work": {
      "type": "object",
      "description": "One curated bibliography row; citation_key is the permanent public URL identifier.",
      "required": [
        "num",
        "citation_key",
        "year",
        "domain",
        "domain_name",
        "type",
        "title",
        "url",
        "doi",
        "docs_path"
      ],
      "fields": {
        "num": "integer; immutable catalog identity, with retired gaps preserved",
        "citation_key": "string; stable URL and BibTeX key",
        "year": "integer",
        "domain": "string; domain emoji code",
        "domain_name": "string; human-readable domain",
        "type": "string; Paper, Book, Course, Presentation, Playbook, or Series",
        "title": "string",
        "venue": "string",
        "url": "string; canonical external identifier or landing page",
        "doi": "string or empty",
        "docs_path": "string or empty; paper-folder path",
        "has_paper_folder": "boolean",
        "has_full_text": "boolean",
        "has_images": "boolean",
        "has_skill_md": "boolean; a per-paper agent SKILL.md exists in the folder",
        "has_agents_md": "boolean; a per-paper AGENTS.md exists in the folder",
        "has_readme": "boolean; a per-paper README.md exists in the folder",
        "full_text_url": "string or empty; site-relative URL of the paper's full_text.md"
      }
    },
    "SoftwareRepository": {
      "type": "object",
      "description": "One curated software catalog row from pages/SOFTWARE.md.",
      "required": [
        "name",
        "url",
        "owner",
        "catalog_section",
        "description",
        "language",
        "paper_path",
        "zenodo_url"
      ],
      "fields": {
        "name": "string",
        "url": "string; GitHub repository URL",
        "owner": "docxology or ActiveInferenceInstitute",
        "catalog_section": "curated source-table section",
        "description": "string",
        "language": "string or empty",
        "stars": "integer or null; API snapshot value",
        "updated_or_year": "string; API snapshot month/year or source year",
        "paper_path": "string or empty",
        "zenodo_url": "string or empty"
      }
    },
    "ArtworkIndex": {
      "type": "object",
      "description": "Compact artwork grid/search projection; full resolution and media details live in VisualArtwork.",
      "required": [
        "id",
        "title",
        "tags",
        "date",
        "views",
        "thumb"
      ],
      "fields": {
        "id": "string; stable Flickr artwork identifier",
        "title": "string",
        "tags": "array of strings",
        "date": "string or empty",
        "views": "string or numeric display count",
        "thumb": "HTTPS thumbnail URL"
      }
    },
    "VideoIndex": {
      "type": "object",
      "description": "Compact video timeline projection; complete topic, relationship, and transcript metadata lives in VideoObject.",
      "required": [
        "schema_version",
        "generated_at",
        "source",
        "count",
        "counts",
        "channels",
        "fields",
        "detail_source",
        "videos"
      ],
      "fields": {
        "schema_version": "VideoIndex.v1",
        "generated_at": "ISO-8601 generation timestamp",
        "source": "data/videos.json",
        "count": "integer",
        "counts": "channel totals and transcript count",
        "channels": "channel freshness metadata",
        "fields": "ordered compact video fields",
        "detail_source": "complete VideoObject export",
        "videos": "array of compact timeline records"
      }
    },
    "Repository": {
      "type": "object",
      "description": "One public repository in the complete GitHub inventory, including forks.",
      "required": [
        "name",
        "full_name",
        "owner",
        "html_url",
        "fork",
        "archived",
        "private",
        "curated",
        "recently_updated"
      ],
      "fields": {
        "full_name": "string; owner/name",
        "html_url": "string",
        "owner": "docxology or ActiveInferenceInstitute",
        "fork": "boolean",
        "archived": "boolean",
        "private": "boolean",
        "curated": "boolean; present in the curated software catalog",
        "recently_updated": "boolean; current inventory freshness flag",
        "created_at": "ISO-8601 timestamp",
        "updated_at": "ISO-8601 timestamp",
        "pushed_at": "ISO-8601 timestamp or null"
      }
    },
    "ClaimWithEvidence": {
      "type": "object",
      "description": "One claim ledger entry with dated verification and explicit caveat handling.",
      "required": [
        "id",
        "claim",
        "status",
        "sources",
        "checked_at",
        "confidence",
        "verification_method",
        "caveat"
      ],
      "fields": {
        "id": "stable claim identifier",
        "claim": "string",
        "status": "curated-local, public-api, dated-snapshot, public-profile, or related evidence status",
        "sources": "array of URLs or repository-relative paths",
        "checked_at": "ISO date or timestamp",
        "confidence": "high, medium, or low",
        "verification_method": "string",
        "maintenance_owner": "role responsible for refresh",
        "caveat": "string; do not silently omit uncertainty"
      }
    },
    "SearchResult": {
      "type": "object",
      "description": "One lexical search-index item spanning pages, works, software, repositories, people, organizations, and claims.",
      "required": [
        "id",
        "type",
        "title",
        "url",
        "summary",
        "tags",
        "content"
      ],
      "fields": {
        "id": "stable type-prefixed identifier",
        "type": "page, work, software, repository, person, organization, claim, or report",
        "title": "string",
        "url": "root-relative public URL",
        "summary": "short human-readable description",
        "tags": "array of strings",
        "content": "normalized search text"
      }
    },
    "GeneratedReport": {
      "type": "object",
      "description": "A dated generated QA, freshness, reconciliation, or deployment report.",
      "required": [
        "generated_at"
      ],
      "fields": {
        "generated_at": "ISO-8601 generation timestamp",
        "checked_at": "ISO date or timestamp when an external source was checked, when applicable",
        "overall_ok": "boolean for reports that aggregate checks",
        "results": "array of check-specific objects for QA/deployment reports",
        "facts": "object of normalized source facts for public-source snapshots"
      }
    },
    "CoverageException": {
      "type": "object",
      "description": "One explicit bibliography coverage gap with a legitimacy/review status.",
      "required": [
        "citation_key",
        "title",
        "type",
        "reasons",
        "review_status"
      ],
      "fields": {
        "citation_key": "string; permanent work identifier",
        "title": "string",
        "type": "string",
        "reasons": "array; no_paper_folder, no_full_text, no_doi, no_canonical_url, or non_paper_record",
        "review_status": "legitimate_gap or needs_review"
      }
    },
    "RepositoryClassification": {
      "type": "object",
      "description": "Review queue row for a public repository outside the curated software catalog, including description-quality triage.",
      "required": [
        "full_name",
        "name",
        "owner",
        "html_url",
        "fork",
        "archived",
        "private",
        "description",
        "description_quality",
        "catalog_role",
        "exclusion_reason",
        "review_status"
      ],
      "fields": {
        "full_name": "string; owner/name",
        "name": "string; repository name",
        "owner": "string",
        "html_url": "https URL",
        "fork": "boolean",
        "archived": "boolean",
        "private": "boolean; inventory privacy state",
        "description": "string; current GitHub description or empty",
        "description_quality": "missing, short, or substantive; triage signal only",
        "language": "string or empty",
        "topics": "array of GitHub topics",
        "recently_updated": "boolean; current inventory freshness flag",
        "relevance": "unknown until manual review",
        "catalog_role": "not_curated, or acknowledged_not_curated for deliberate exclusions",
        "exclusion_reason": "fork_not_curated, primary_repo_requires_manual_review, or acknowledged_not_catalogued",
        "review_status": "defer, acknowledged, accept, reject, or supersede",
        "acknowledged_reason": "present when review_status is acknowledged; one of profile_repo, profile_infrastructure, test_repo, website, rename_duplicate, private_mirror (see data/repository-exclusions.json)"
      }
    },
    "PagesArtifactManifest": {
      "type": "object",
      "description": "Bounded GitHub Pages projection file list, byte budget, omitted-image policy, and GitHub fallback templates.",
      "required": [
        "schema_version",
        "source_commit_at_generation",
        "github_fallback",
        "budget",
        "included_files",
        "omitted_paper_images"
      ],
      "fields": {
        "source_commit_at_generation": "Git commit used when the artifact was measured",
        "github_fallback": "tree/raw URL templates",
        "budget": "hard limit, safety ceiling, warning, file count, and byte totals",
        "included_files": "array of included path/size/hash records",
        "omitted_paper_images": "count and fallback-preserving policy summary"
      }
    },
    "ReleaseIntegrity": {
      "type": "object",
      "description": "Source-to-release integrity envelope connecting hashes, generators, Pages, deployment, and live verification.",
      "required": [
        "schema_version",
        "source_sha256",
        "generator",
        "pages_artifact",
        "deployment",
        "privacy"
      ],
      "fields": {
        "source_sha256": "map of source/generated input paths to SHA-256",
        "generator": "ordered pipeline and generator hashes",
        "pages_artifact": "bounded artifact manifest summary",
        "deployment": "workflow/deployment and live verification metadata, including current source commit and explicit deployment_pending reasons",
        "privacy": "CV public-integrity result and policy"
      }
    },
    "VisualArtwork": {
      "type": "object",
      "description": "One complete gallery artwork record (pen-and-ink or blockchain art); the full counterpart to the compact ArtworkIndex projection. Aligns with schema.org VisualArtwork.",
      "schema_org": "https://schema.org/VisualArtwork",
      "required": [
        "id",
        "title",
        "tags",
        "date",
        "views",
        "media",
        "thumb",
        "flickr_url",
        "sizes"
      ],
      "fields": {
        "id": "string; stable Flickr artwork identifier",
        "title": "string",
        "desc": "string; artwork description or empty",
        "tags": "array of strings",
        "date": "string or empty",
        "views": "string or numeric display count",
        "media": "string; medium/format label",
        "thumb": "HTTPS thumbnail URL",
        "flickr_url": "HTTPS canonical Flickr page URL",
        "sizes": "object; resolution label to HTTPS image URL map"
      }
    },
    "VideoObject": {
      "type": "object",
      "description": "One complete video record; the full counterpart to the compact VideoIndex projection. Aligns with schema.org VideoObject.",
      "schema_org": "https://schema.org/VideoObject",
      "required": [
        "id",
        "title",
        "channel",
        "upload_date",
        "youtube_url",
        "embed_url",
        "page_url"
      ],
      "fields": {
        "id": "string; YouTube video identifier",
        "title": "string",
        "channel": "string; channel slug",
        "channel_name": "string",
        "channel_url": "HTTPS channel URL",
        "upload_date": "ISO-8601 date",
        "year": "integer",
        "duration": "duration in seconds or ISO-8601",
        "duration_text": "human-readable duration",
        "view_count": "integer or display string",
        "youtube_url": "HTTPS watch URL",
        "embed_url": "HTTPS embeddable player URL",
        "thumbnail_url": "HTTPS thumbnail URL",
        "page_url": "HTTPS canonical on-site video page",
        "transcript_available": "boolean",
        "transcript_path": "string or empty; repository-relative transcript",
        "topics": "array of strings",
        "related_pages": "array; on-site related page URLs",
        "related_works": "array; related work citation_keys"
      }
    },
    "Person": {
      "type": "object",
      "description": "One collaborator or identity record. Aligns with schema.org Person.",
      "schema_org": "https://schema.org/Person",
      "required": [
        "name",
        "role"
      ],
      "fields": {
        "name": "string",
        "role": "string; relationship or contribution role",
        "orcid": "string or empty; ORCID URL",
        "wikidata": "string or empty; Wikidata QID URL",
        "homepage": "string or empty",
        "github": "string or empty; GitHub profile URL"
      }
    },
    "Organization": {
      "type": "object",
      "description": "One institutional affiliation record. Aligns with schema.org Organization.",
      "schema_org": "https://schema.org/Organization",
      "required": [
        "name",
        "role"
      ],
      "fields": {
        "name": "string",
        "alternate_names": "array of strings",
        "url": "string; canonical URL",
        "public_landing_page": "string or empty",
        "wikidata": "string or empty; Wikidata QID URL",
        "github": "string or empty; GitHub account URL",
        "github_account_type": "User or Organization",
        "ein": "string or empty; US tax identifier",
        "irs_status": "string or empty",
        "role": "string; affiliation role"
      }
    },
    "ResumeData": {
      "type": "object",
      "description": "Structured CV: profile, contact, metrics, and dated education/experience/awards/service sections with per-variant selection.",
      "required": [
        "profile",
        "education",
        "experience"
      ],
      "fields": {
        "profile": "object; name, title, and summary",
        "contact": "object; email and public links",
        "metrics": "object; citation and output counts",
        "education": "array of degree records",
        "experience": "array of role records",
        "awards": "array",
        "service": "array",
        "works": "array; selected work references",
        "software": "array; selected software references",
        "variants": "object; named CV variant section selections"
      }
    },
    "WorkEnrichment": {
      "type": "object",
      "description": "Abstracts and keywords extracted from paper folders, keyed to Work citation identifiers.",
      "required": [
        "generated_at",
        "source",
        "count",
        "works"
      ],
      "fields": {
        "generated_at": "ISO-8601 timestamp",
        "source": "string; extraction source",
        "count": "integer",
        "works": "array or object; per-work abstract and keyword enrichment"
      }
    },
    "DataCatalog": {
      "type": "object",
      "description": "Schema.org DataCatalog describing every public JSON export as a Dataset with a DataDownload distribution.",
      "schema_org": "https://schema.org/DataCatalog",
      "required": [
        "@context",
        "@type",
        "name",
        "dataset"
      ],
      "fields": {
        "@type": "DataCatalog",
        "name": "string",
        "url": "string",
        "dataset": "array of schema.org Dataset nodes, each with url, encodingFormat, license, and distribution"
      }
    },
    "ReconciliationReport": {
      "type": "object",
      "description": "Curated local counts compared against public-source indexes (ORCID, PubMed, Crossref, Zenodo, GitHub), with an explicit relationship interpretation per comparison.",
      "required": [
        "generated_at",
        "comparisons"
      ],
      "fields": {
        "generated_at": "ISO-8601 timestamp",
        "snapshot": "string; public-source snapshot report path",
        "claims_count": "integer",
        "comparisons": "array; each has name, local_value, public_value, relationship, and interpretation"
      }
    },
    "GeneratedManifest": {
      "type": "object",
      "description": "Source-to-output rebuild map: every generated artifact with the sources it derives from and the command that produces it.",
      "required": [
        "generated_at",
        "artifacts"
      ],
      "fields": {
        "generated_at": "ISO-8601 timestamp",
        "artifacts": "array; each has name, outputs, sources, and command"
      }
    }
  },
  "schema_registry_version": "1.2",
  "schema_examples": {
    "Work": [
      {
        "num": 1,
        "citation_key": "Friedman2026TemplateApproachReproducibleGenerative001",
        "year": 2026,
        "domain": "💻",
        "domain_name": "Computational",
        "type": "Paper",
        "title": "A template/ approach to Reproducible Generative Research: Architecture and Ergonomics from Configuration through Publication",
        "venue": "Zenodo",
        "url": "https://doi.org/10.5281/zenodo.16903351",
        "doi": "10.5281/zenodo.16903351",
        "docs_path": "papers/2026_ReproducibleResearch/",
        "has_paper_folder": true,
        "has_full_text": true,
        "has_images": true,
        "has_skill_md": true,
        "has_agents_md": true,
        "has_readme": true,
        "full_text_url": "/papers/2026_ReproducibleResearch/full_text.md",
        "authors": [
          "Friedman, Daniel Ari"
        ]
      }
    ],
    "SoftwareRepository": [
      {
        "name": "template",
        "url": "https://github.com/docxology/template",
        "owner": "docxology",
        "catalog_section": "docxology",
        "description": "Production-grade scaffold for reproducible computational research — 10-stage DAG pipelines, ≥90% test coverage, cryptographic provenance, multi-project workspace, and agent-ready documentation · Zenodo software v3.3.0 · Zenodo",
        "language": "Python",
        "stars": 17,
        "updated_or_year": "2026-06",
        "paper_path": "papers/2026_AutopoieticProjectGeneration/",
        "zenodo_url": "https://doi.org/10.5281/zenodo.20584820"
      }
    ],
    "ArtworkIndex": [
      {
        "id": "53164392892",
        "title": "All-domain Anomaly Resolution Office (AARO)",
        "tags": [
          "pen",
          "ink",
          "drawing",
          "aaro",
          "alldomain",
          "anomaly",
          "resolution",
          "office",
          "us",
          "emb",
          "emblem",
          "usa"
        ],
        "date": "2023-09-04 17:12:02",
        "views": "698",
        "thumb": "https://live.staticflickr.com/65535/53164392892_f86440bb11_m.jpg"
      }
    ],
    "VideoIndex": {
      "schema_version": "VideoIndex.v1",
      "generated_at": "2026-08-10T17:11:59Z",
      "source": "data/videos.json",
      "count": 1127,
      "counts": {
        "total": 1127,
        "personal": 405,
        "institute": 722,
        "with_transcripts": 4
      },
      "channels": {
        "personal": {
          "channel_id": "personal",
          "channel_url": "https://www.youtube.com/@danielarifriedman",
          "fetched_at": "2026-06-20T05:01:37.205539+00:00",
          "video_count": 405,
          "schema_version": "1.0"
        },
        "institute": {
          "channel_id": "institute",
          "channel_url": "https://www.youtube.com/@activeinference",
          "fetched_at": "2026-06-20T05:01:37.256048+00:00",
          "video_count": 722,
          "schema_version": "1.0"
        }
      },
      "fields": [
        "id",
        "title",
        "channel",
        "upload_date",
        "year",
        "duration",
        "view_count"
      ],
      "detail_source": "data/videos.json",
      "videos": [
        {
          "id": "kxKgdvFHOLM",
          "title": "Red Harvester Ants entering and exiting a laboratory nest",
          "channel": "personal",
          "upload_date": "20150517",
          "year": 2015,
          "duration": 97.0,
          "view_count": 8
        }
      ]
    },
    "Repository": [
      {
        "name": "act_inf_metaanalysis",
        "full_name": "ActiveInferenceInstitute/act_inf_metaanalysis",
        "owner": "ActiveInferenceInstitute",
        "html_url": "https://github.com/ActiveInferenceInstitute/act_inf_metaanalysis",
        "description": "A computational meta-analysis of the Active Inference literature. An automated LLM pipeline extracts assertions from 849 papers across theory, tools, and domains, structuring them as nanopublications. By mapping these into a citation-weighted knowledge graph, this project provides a reproducible, living review of hypothesis-level consensus.",
        "homepage": "",
        "language": "HTML",
        "stars": 6,
        "forks": 1,
        "watchers": 6,
        "open_issues": 0,
        "visibility": "public",
        "private": false,
        "fork": false,
        "archived": false,
        "disabled": false,
        "is_template": false,
        "topics": [],
        "license": "NOASSERTION",
        "default_branch": "main",
        "created_at": "2026-04-07T20:10:34Z",
        "updated_at": "2026-08-03T00:33:52Z",
        "pushed_at": "2026-08-03T00:33:48Z",
        "curated": true,
        "recently_updated": true
      }
    ],
    "ClaimWithEvidence": [
      {
        "id": "curated-work-count",
        "claim": "The curated bibliography contains 208 works.",
        "status": "curated-local",
        "sources": [
          "pages/BIBLIOGRAPHY.md",
          "publications.html",
          "data/works.json"
        ],
        "checked_at": "2026-08-13T17:52:47+00:00",
        "confidence": "high",
        "verification_method": "Generated from the 8-column bibliography table and cross-checked against publications.html.",
        "maintenance_owner": "ARCHIVIST",
        "caveat": "Curated count includes papers, books, presentations, courses, playbooks, and series."
      }
    ],
    "SearchResult": [
      {
        "id": "page:home",
        "type": "page",
        "title": "Daniel Ari Friedman",
        "url": "/",
        "summary": "Homepage and professional profile.",
        "tags": [
          "homepage",
          "profile"
        ],
        "content": "Daniel Ari Friedman Homepage and professional profile. homepage profile"
      }
    ],
    "CoverageException": [
      {
        "num": 2,
        "citation_key": "Friedman2026ActiveInferenceJournal500002",
        "title": "Active Inference Journal — 500+ videos on Active Inference with transcripts",
        "type": "Series",
        "reasons": [
          "no_paper_folder",
          "no_full_text",
          "no_doi",
          "non_paper_record"
        ],
        "review_status": "legitimate_gap",
        "notes": "Coverage exception is retained explicitly; do not infer that the source is missing or invalid."
      }
    ],
    "RepositoryClassification": [
      {
        "full_name": "ActiveInferenceInstitute/Active_Inference_Un0",
        "name": "Active_Inference_Un0",
        "owner": "ActiveInferenceInstitute",
        "html_url": "https://github.com/ActiveInferenceInstitute/Active_Inference_Un0",
        "fork": false,
        "archived": false,
        "private": false,
        "description": "",
        "description_quality": "missing",
        "language": "",
        "topics": [],
        "recently_updated": true,
        "relevance": "unknown",
        "catalog_role": "not_curated",
        "exclusion_reason": "primary_repo_requires_manual_review",
        "review_status": "defer"
      }
    ],
    "GeneratedReport": {
      "check_command": "uv run python3 code/orchestrators/build_current_counts.py --check",
      "command": "uv run python3 code/orchestrators/build_current_counts.py",
      "counts": {
        "bibliography_docs_links": 191,
        "bibliography_works": 208,
        "domains": {
          "AII Ecosystem": 6,
          "Active Inference": 45,
          "Art & Synergetics": 16,
          "Cognitive Security": 35,
          "Computational": 53,
          "Entomology": 23,
          "Genetics & Biomedical": 15,
          "Presentations & Media": 15
        },
        "extracted_images": 8886,
        "full_text_papers": 171,
        "generated_exports": {
          "data_publications_ld_main_entity": 208,
          "data_software_json": 146,
          "data_software_ld_main_entity": 146,
          "data_works_json": 208
        },
        "github_inventory": {
          "ActiveInferenceInstitute": 43,
          "archived": 0,
          "curated": 143,
          "docxology": 201,
          "fork_ActiveInferenceInstitute": 2,
          "fork_docxology": 85,
          "forks": 87,
          "primary_ActiveInferenceInstitute": 41,
          "primary_docxology": 116,
          "primary_total": 157,
          "private": 0,
          "public": 244,
          "recently_updated": 147,
          "total": 244,
          "uncataloged": 101
        },
        "paired_publication_decisions": {
          "decision": "accept",
          "groups": 27,
          "note": "Manual review decisions accept represented GitHub release + Zenodo record relations; software-only records remain software/version metadata unless a bibliography folder is explicitly curated. R20-R24 record CEREBRUM, SIA, and On-Policy Distillation supersession/version-history decisions so newer versions do not create duplicate bibliography rows. R26-R27 record CogSecSkills (9 release pairs) and Codomyrmex (18 release pairs) supersession/version-history decisions under already-cited DOIs so versioned GitHub releases do not create duplicate bibliography rows.",
          "raw_candidates": 114
        },
        "paired_publications": {
          "already_reviewed": 28,
          "create_new": 0,
          "github_releases": 221,
          "needs_review": 345,
          "pairs": 418,
          "strong_pairs": 46,
          "update_existing": 45,
          "zenodo_records": 147
        },
        "paper_folder_docs": 191,
        "papers_with_images": 139,
        "public_source_snapshot": {
          "Crossref ORCID DOI records": 15,
          "Europe PMC exact author records": 10,
          "GitHub user ActiveInferenceInstitute": 40,
          "GitHub user docxology": 347,
          "ORCID work groups": 20,
          "PubMed exact author records": 8,
          "Zenodo ORCID-linked records": 131,
          "Zenodo exact-name creator records": 47
        },
        "software": {
          "active_inference_institute": 41,
          "curated_total": 146,
          "docxology_owned": 105
        },
        "types": {
          "Books": 5,
          "Courses": 3,
          "Papers": 187,
          "Playbooks": 2,
          "Presentations": 9,
          "Series": 2
        }
      },
      "generated_at": "2026-08-13T17:52:47+00:00",
      "sources": {
        "bibliography": "pages/BIBLIOGRAPHY.md",
        "github_inventory": "data/github-repositories.json",
        "paired_publication_decisions": "data/paired-publication-decisions.json",
        "paired_publications": "reports/paired_publications_2026-08-10.json",
        "paper_folders": "papers/README.md",
        "public_source_snapshot": "reports/public_source_snapshot_2026-07-21.json",
        "software_catalog": "pages/SOFTWARE.md",
        "software_export": "data/software.json",
        "works_export": "data/works.json"
      },
      "validation": [
        "uv run python3 code/orchestrators/validate_repo.py",
        "PYTHONDONTWRITEBYTECODE=1 uv run python3 -m pytest code/tests -q"
      ]
    },
    "PagesArtifactManifest": {
      "schema_version": "1.0",
      "budget": {
        "hard_limit_bytes": 1073741824,
        "safety_ceiling_bytes": 943718400,
        "warning_bytes": 891289600,
        "source_bytes": 875969408,
        "budget_scope": "published content files plus this manifest; control metadata files are listed but excluded to avoid self-referential hashes",
        "manifest_bytes_excluded_from_source_bytes": true,
        "artifact_file_count": 4508,
        "artifact_bytes": 876762471
      },
      "github_fallback": {
        "tree_template": "https://github.com/docxology/docxology/tree/{commit}/{path}",
        "raw_template": "https://raw.githubusercontent.com/docxology/docxology/{commit}/{path}"
      }
    },
    "ReleaseIntegrity": {
      "schema_version": "1.0",
      "note": "See /data/release-integrity.json for the current envelope."
    }
  },
  "dataset_hashes": {
    "works": "ad766faac7c459c6cde07ef486155025cd1e62bd04b6c2d6733ae1f98369fb59",
    "software": "d7b1736cd1265f58603a6801452fce0a1b6101c36abc152034b000eca97da787",
    "repositories": "b71d39d61261910ce426e24de80324d9302affa76c2819a0ff9325e6f728b14c",
    "artworks_index": "25adc127f1d2a46abd676ac37735a0bf6d2fbabea25992b609f203f24f78977c",
    "artworks": "074db5f8427fcd93afcd47f800b893063fb040b6ecc68f6ea320b4fccb4f6883",
    "videos": "8ccf116d82a7c46861fd52cd7d65a7351c72961bc4101bd72ada3423e64ae665",
    "videos_index": "f9fec383f49d08b11a258d03e62c98995f857c0e68c3a95e79ddd9eb000d808f",
    "search": "d018110aad647bab0ed518c4b7c10506d57c14991268b73eb459e2ccd9f730fa",
    "claims": "3cfc0ddf3cd4b8baa0754328ed1564c59c8fd3f2af79b9909f37df3e4634b926",
    "coverage_exceptions": "09739872183fc88f71b5790a67505b2088a2616f3e0aedcc73ba1679eb761a9a",
    "repository_classification": "4e086ed3e3985693cd8b14588a4d3451a355869dd60f1a9b7aeeb38297d3f6ac",
    "people": "f9e8c54eec108516491e3b441d31e35861b027872651d93f40aa931d665fa342",
    "organizations": "79650c6a0a30f2f72a60a3ff50f3c212912b5df32198c84a9a0992af5e778e20",
    "resume": "9e0622c975709c3dcdd7e121e6c19cb321db5d8e7e4ff5afd554cf3e8d1fab74",
    "work_enrichment": "ebb9b81bb67cb8d030a3e3fea981be4bfdfa1edaeeae4f212a206835548b13c6",
    "catalog": "d5538667f24f0a965088b0b5e00ff8053015fbe76eaa5ac614c2e9d55ee4a3f5",
    "reconciliation": "7016d85aca4a907bf4fc5f1a4b057ef883f98308d0bb2feb3f5c2857acd3ee64",
    "generated_manifest": "c8a03b8e7c7d5a7aa03d4b607351c79a0c31701674af08f7eb92b39fe450c556",
    "current_counts": "38de3f4142a046f0c49e5cf21c3b298f7274adc080b367f1391c3fcc5f727e0f"
  },
  "source_provenance": {
    "generated_by": "code/orchestrators/build_agent_index.py",
    "source_of_truth": [
      "pages/BIBLIOGRAPHY.md",
      "pages/SOFTWARE.md",
      "data/current-counts.json"
    ],
    "hash_policy": "SHA-256 values cover hosted JSON datasets and integrity manifests at generation time."
  },
  "hosted_availability": {
    "pages_origin": "https://danielarifriedman.com/",
    "github_repository": "https://github.com/docxology/docxology",
    "artifact_manifest": "/data/pages-artifact-manifest.json",
    "paper_image_fallback": "Use the Pages artifact manifest GitHub tree/raw templates for omitted extracted paper images."
  },
  "verification_status": {
    "live_report": "/reports/live_site_verification_2026-08-13.json",
    "generated_at": "2026-08-13T17:55:19Z",
    "overall_ok": false,
    "passing": 12,
    "checked_urls": 17,
    "pages_status": "built"
  },
  "counts": {
    "bibliography_docs_links": 191,
    "bibliography_works": 208,
    "domains": {
      "AII Ecosystem": 6,
      "Active Inference": 45,
      "Art & Synergetics": 16,
      "Cognitive Security": 35,
      "Computational": 53,
      "Entomology": 23,
      "Genetics & Biomedical": 15,
      "Presentations & Media": 15
    },
    "extracted_images": 8886,
    "full_text_papers": 171,
    "generated_exports": {
      "data_publications_ld_main_entity": 208,
      "data_software_json": 146,
      "data_software_ld_main_entity": 146,
      "data_works_json": 208
    },
    "github_inventory": {
      "ActiveInferenceInstitute": 43,
      "archived": 0,
      "curated": 143,
      "docxology": 201,
      "fork_ActiveInferenceInstitute": 2,
      "fork_docxology": 85,
      "forks": 87,
      "primary_ActiveInferenceInstitute": 41,
      "primary_docxology": 116,
      "primary_total": 157,
      "private": 0,
      "public": 244,
      "recently_updated": 147,
      "total": 244,
      "uncataloged": 101
    },
    "paired_publication_decisions": {
      "decision": "accept",
      "groups": 27,
      "note": "Manual review decisions accept represented GitHub release + Zenodo record relations; software-only records remain software/version metadata unless a bibliography folder is explicitly curated. R20-R24 record CEREBRUM, SIA, and On-Policy Distillation supersession/version-history decisions so newer versions do not create duplicate bibliography rows. R26-R27 record CogSecSkills (9 release pairs) and Codomyrmex (18 release pairs) supersession/version-history decisions under already-cited DOIs so versioned GitHub releases do not create duplicate bibliography rows.",
      "raw_candidates": 114
    },
    "paired_publications": {
      "already_reviewed": 28,
      "create_new": 0,
      "github_releases": 221,
      "needs_review": 345,
      "pairs": 418,
      "strong_pairs": 46,
      "update_existing": 45,
      "zenodo_records": 147
    },
    "paper_folder_docs": 191,
    "papers_with_images": 139,
    "public_source_snapshot": {
      "Crossref ORCID DOI records": 15,
      "Europe PMC exact author records": 10,
      "GitHub user ActiveInferenceInstitute": 40,
      "GitHub user docxology": 347,
      "ORCID work groups": 20,
      "PubMed exact author records": 8,
      "Zenodo ORCID-linked records": 131,
      "Zenodo exact-name creator records": 47
    },
    "software": {
      "active_inference_institute": 41,
      "curated_total": 146,
      "docxology_owned": 105
    },
    "types": {
      "Books": 5,
      "Courses": 3,
      "Papers": 187,
      "Playbooks": 2,
      "Presentations": 9,
      "Series": 2
    }
  },
  "freshness": {
    "policy": "Use generated_at and checked_at fields; do not infer freshness from page copy.",
    "volatile_sources": [
      "data/current-counts.json",
      "data/scholar-snapshot.json",
      "data/verification-log.json"
    ],
    "verification": "/cite-verify.html"
  },
  "query_recipes": {
    "site_search": "/search.html?q={urlencoded_terms}",
    "publication_filter": "/publications.html?domain={emoji}&type={type}&year={year}",
    "work_by_key": "/works/{citation_key}.html",
    "raw_bibliography": "/pages/BIBLIOGRAPHY.md",
    "repository_by_full_name": "/repositories.html?repo={owner}/{name}",
    "claim_by_id": "/data/claims.json#id={claim_id}",
    "reports": "/data/agent-index.json#reports",
    "coverage_exceptions": "/data/coverage-exceptions.json",
    "repository_classification": "/data/repository-classification.json",
    "release_integrity": "/data/release-integrity.json"
  },
  "notes": [
    "Canonical work URLs use citation_key values and preserve retired numeric gaps.",
    "Paper-folder pages are documentation mirrors; canonical indexable work pages live under /works/.",
    "External facts and metrics are evidence-dated; retain caveats when primary verification is incomplete.",
    "Pages omits duplicated paper-extracted image binaries only; use the manifest fallback templates for GitHub retrieval.",
    "Coverage exceptions and repository classifications are review queues, not automatic certification or rejection."
  ]
}