Entomology · Paper · 2025

The Ant Stack

Daniel Ari Friedman

Zenodo

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Overview

AntStack presents a multilevel framework for modeling ant colony organization, from molecular and neural processes at the individual scale through interaction networks to colony-level behavioral patterns. The framework provides a structured approach to integrating diverse biological data across scales in social insect research.

AntStackmultilevel modelingant coloniessocial insectsmultiscale biologycolony organization

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Methods and contributions

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Findings and contributions

  • The paper presents the Ant Stack, a compact modular framework (AntBody, AntBrain, AntMind) intended to emulate an ant from physics to cognition.
  • Stated contributions include an executable I/O contract between layers, a compact neural pipeline with local plasticity, and a minimal active-inference agent composing via stigmergy.
  • The work specifies (rather than reports results from) evaluation suites for navigation, trail following, task allocation and robustness under noise/adversaries.
  • The author states that no high-fidelity ant brain emulation yet closes the loop with a realistic body at interactive rates.
  • Stated limitations: no ant connectome (fly/bee templates used), simulation-first scope with embedded real-time operation as future work, and field validation still needed.

Methods

  • AntBody: FlyBody MuJoCo simulator adapted to ant morphology — The body layer adapts the FlyBody MuJoCo simulator to ant leg kinematics, exoskeleton and antennae/mandible actuation, portable to PyBullet.
  • Explicit Body–Brain I/O contract with fixed rates and SI units — Specifies observations and actions at 100 Hz over a 1 ms physics step, with a latency budget and clock-drift bound.
  • AntBrain AL→MB→CX pipeline templated from fly/bee brains — A functional neural abstraction templated from Drosophila/Apis via Virtual Fly Brain, with sparse Kenyon-cell coding, local plasticity and a ring-attractor CX.
  • AntMind minimal active-inference generative model — A single-agent generative model over pose, heading, hunger and pheromone expectation, with variational free energy updates and short-horizon policy selection.
  • Diffusion–decay pheromone field for stigmergy — Colony coordination via a grid pheromone field with decay λ, diffusion D and reward-linked deposits, which agents follow along the gradient.

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Citation

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Friedman, Daniel Ari. 2025. The Ant Stack. Zenodo. DOI: 10.5281/zenodo.16782756. URL: https://doi.org/10.5281/zenodo.16782756.
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Citation keyFriedman2025AntStack025
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