---
name: "BeeStack"
description: "Use for BeeStack: An Evidence-Typed Scaffold for Whole-Colony Honeybee Simulation, a paired GitHub and Zenodo publication with DOI 10.5281/zenodo.20420557."
tags: ["honeybee", "apis-mellifera", "active-inference", "simulation-scaffold", "swarm-intelligence", "niche-construction", "flybody", "mujoco"]
---

# BeeStack: An Evidence-Typed Scaffold for Whole-Colony Honeybee Simulation

## Instructions

Use this skill when working with the publication **BeeStack: An Evidence-Typed Scaffold for Whole-Colony Honeybee Simulation** or its paired release artifacts.

1. Ground citations in DOI `10.5281/zenodo.20420557`.
2. Treat the Zenodo record as the archival source and the GitHub release as the executable/source release.
3. Keep release tag `v1.0.0` and repository `docxology/BeeStack` linked when updating catalog surfaces.

## Key Concepts

- **honeybee**
- **Apis mellifera**
- **active inference**
- **simulation scaffold**
- **swarm intelligence**
- **niche construction**
- **FlyBody**
- **MuJoCo**
- **antennal lobe**
- **mushroom body**
- **central complex**
- **waggle dance**
- **BEEHAVE**
- **reproducible research**

## Prerequisites

- Familiarity with the source repository and Zenodo record.
- Awareness that new versions may update both GitHub and Zenodo surfaces.

## Related

- [README.md](README.md)
- [Full Bibliography](../../pages/BIBLIOGRAPHY.md)