{
  "generated_at": "2026-06-09T18:25:12Z",
  "source": "pages/BIBLIOGRAPHY.md",
  "count": 165,
  "works": [
    {
      "num": 1,
      "citation_key": "Friedman2026TemplateApproachReproducibleGenerative001",
      "year": 2026,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "A template/ approach to Reproducible Generative Research: Architecture and Ergonomics from Configuration through Publication",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.19139090",
      "doi": "10.5281/zenodo.19139090",
      "docs_path": "papers/2026_ReproducibleResearch/",
      "has_paper_folder": true
    },
    {
      "num": 2,
      "citation_key": "Friedman2026ActiveInferenceJournal500002",
      "year": 2026,
      "domain": "🎥",
      "domain_name": "Media & Teaching",
      "type": "Series",
      "title": "Active Inference Journal — 500+ videos on Active Inference with transcripts",
      "venue": "YouTube",
      "url": "https://video.activeinference.institute/",
      "doi": "",
      "docs_path": "",
      "has_paper_folder": false
    },
    {
      "num": 3,
      "citation_key": "Friedman2026BeforePragmatismHadName003",
      "year": 2026,
      "domain": "🎨",
      "domain_name": "Art & Synergetics",
      "type": "Paper",
      "title": "Before Pragmatism Had a Name: Blake's \"America A Prophecy\" Anticipates American Anticipatory Epistemology",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.18807970",
      "doi": "10.5281/zenodo.18807970",
      "docs_path": "papers/2026_BeforePragmatism/",
      "has_paper_folder": true
    },
    {
      "num": 4,
      "citation_key": "Friedman2026GoldenCompassLunarFlux004",
      "year": 2026,
      "domain": "🎨",
      "domain_name": "Art & Synergetics",
      "type": "Paper",
      "title": "The Golden Compass and the Lunar Flux: William Blake, Bimetallic Meta-stability, and the Architecture of Value",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.19335196",
      "doi": "10.5281/zenodo.19335196",
      "docs_path": "papers/2026_Bimetalism/",
      "has_paper_folder": true
    },
    {
      "num": 5,
      "citation_key": "Friedman2026CognitiveIntegrityFrameworkFormal005",
      "year": 2026,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Cognitive Integrity Framework: Formal Foundations for Multiagent Security (Part 1: Theory)",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.18364119",
      "doi": "10.5281/zenodo.18364119",
      "docs_path": "papers/2026_CognitiveIntegrity/",
      "has_paper_folder": true
    },
    {
      "num": 6,
      "citation_key": "Friedman2026PersonalYouTube200Livestreams006",
      "year": 2026,
      "domain": "🎥",
      "domain_name": "Media & Teaching",
      "type": "Series",
      "title": "Personal YouTube — 200+ livestreams: drawings, Synergetics, paper discussions",
      "venue": "YouTube",
      "url": "https://www.youtube.com/@danielarifriedman/playlists",
      "doi": "",
      "docs_path": "",
      "has_paper_folder": false
    },
    {
      "num": 7,
      "citation_key": "Friedman2026DoorsPerceptionAreThreshold007",
      "year": 2026,
      "domain": "🎨",
      "domain_name": "Art & Synergetics",
      "type": "Paper",
      "title": "The Doors of Perception are the Threshold of Prediction: Active Inference and William Blake's Theory of Seeing",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.18600041",
      "doi": "10.5281/zenodo.18600041",
      "docs_path": "papers/2026_DoorsOfPerception/",
      "has_paper_folder": true
    },
    {
      "num": 8,
      "citation_key": "Friedman20255thAppliedActiveInference008",
      "year": 2025,
      "domain": "🎥",
      "domain_name": "Media & Teaching",
      "type": "Presentation",
      "title": "5th Applied Active Inference Symposium — Abstract Book",
      "venue": "Presentation",
      "url": "https://doi.org/10.5281/zenodo.17555266",
      "doi": "10.5281/zenodo.17555266",
      "docs_path": "papers/2025_5thSymposium/",
      "has_paper_folder": true
    },
    {
      "num": 9,
      "citation_key": "Friedman2025AdaptiveBasicIncomeAuBI009",
      "year": 2025,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "Adaptive Basic Income (AuBI): Integrating AI, Decentralized Infrastructure, and Active Inference",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.17228945",
      "doi": "10.5281/zenodo.17228945",
      "docs_path": "papers/2025_AuBI/",
      "has_paper_folder": true
    },
    {
      "num": 10,
      "citation_key": "Friedman2025CEREBRUMCaseEnabledReasoning010",
      "year": 2025,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "CEREBRUM: Case-Enabled Reasoning Engine with Bayesian Representations for Unified Modeling",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.15170907",
      "doi": "10.5281/zenodo.15170907",
      "docs_path": "papers/2025_CEREBRUM/",
      "has_paper_folder": true
    },
    {
      "num": 11,
      "citation_key": "Friedman2025ComputationalComplexityEnergeticsAnt011",
      "year": 2025,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "Computational Complexity and Energetics of the Ant Stack",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.17238736",
      "doi": "10.5281/zenodo.17238736",
      "docs_path": "papers/2025_AntStackComplexity/",
      "has_paper_folder": true
    },
    {
      "num": 12,
      "citation_key": "Friedman2025EvoJumpStochasticModelingEvolutionary012",
      "year": 2025,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "EvoJump: Stochastic Modeling of Evolutionary Ontogenetic Trajectories",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.17229924",
      "doi": "10.5281/zenodo.17229924",
      "docs_path": "papers/2025_EvoJump/",
      "has_paper_folder": true
    },
    {
      "num": 13,
      "citation_key": "Friedman2025IncreasingAccessibilityApplicabilityActive013",
      "year": 2025,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Increasing the Accessibility and Applicability of Active Inference",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.15061667",
      "doi": "10.5281/zenodo.15061667",
      "docs_path": "papers/2025_AccessibilityActiveInference/",
      "has_paper_folder": true
    },
    {
      "num": 14,
      "citation_key": "Friedman2025MDKVMultitrackMarkdownContainer014",
      "year": 2025,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "MDKV: A Multitrack Markdown Container for Structured, Portable Documents",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.16790554",
      "doi": "10.5281/zenodo.16790554",
      "docs_path": "papers/2025_MDKV/",
      "has_paper_folder": true
    },
    {
      "num": 15,
      "citation_key": "Friedman2025MarkdownDecisionProcessFramework015",
      "year": 2025,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "Markdown Decision Process: A Framework for Probabilistic Document Analysis",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.17244386",
      "doi": "10.5281/zenodo.17244386",
      "docs_path": "papers/2025_MarkdownDecisionProcess/",
      "has_paper_folder": true
    },
    {
      "num": 16,
      "citation_key": "Friedman2025CognitiveArtScienceToward016",
      "year": 2025,
      "domain": "🎨",
      "domain_name": "Art & Synergetics",
      "type": "Paper",
      "title": "On Cognitive Art & Science: Toward Wholeness From Both Sides",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.16740439",
      "doi": "10.5281/zenodo.16740439",
      "docs_path": "papers/2025_CognitiveArtScience/",
      "has_paper_folder": true
    },
    {
      "num": 17,
      "citation_key": "Friedman2025Time017",
      "year": 2025,
      "domain": "🎨",
      "domain_name": "Art & Synergetics",
      "type": "Paper",
      "title": "On Time",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.15168381",
      "doi": "10.5281/zenodo.15168381",
      "docs_path": "papers/2025_OnTime/",
      "has_paper_folder": true
    },
    {
      "num": 18,
      "citation_key": "Friedman2025QuadMathAnalyticalReview4D018",
      "year": 2025,
      "domain": "🎨",
      "domain_name": "Art & Synergetics",
      "type": "Paper",
      "title": "QuadMath: An Analytical Review of 4D and Quadray Coordinates",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.16887800",
      "doi": "10.5281/zenodo.16887800",
      "docs_path": "papers/2025_QuadMath/",
      "has_paper_folder": true
    },
    {
      "num": 19,
      "citation_key": "Friedman2025ResNeiSolutionDesignDocument019",
      "year": 2025,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "ResNei: Solution Design Document",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.15389682",
      "doi": "10.5281/zenodo.15389682",
      "docs_path": "papers/2025_ResNei/",
      "has_paper_folder": true
    },
    {
      "num": 20,
      "citation_key": "Friedman2025SymergeticsSymbolicSynergeticsRational020",
      "year": 2025,
      "domain": "🎨",
      "domain_name": "Art & Synergetics",
      "type": "Paper",
      "title": "Symergetics: Symbolic Synergetics for Rational Arithmetic",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.17114389",
      "doi": "10.5281/zenodo.17114389",
      "docs_path": "papers/2025_Symergetics/",
      "has_paper_folder": true
    },
    {
      "num": 21,
      "citation_key": "Friedman2025SynthesisAgentNiche021",
      "year": 2025,
      "domain": "🎨",
      "domain_name": "Art & Synergetics",
      "type": "Paper",
      "title": "Synthesis of Agent and Niche",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.17235137",
      "doi": "10.5281/zenodo.17235137",
      "docs_path": "papers/2025_AgentAndNiche/",
      "has_paper_folder": true
    },
    {
      "num": 22,
      "citation_key": "Friedman2025SystemsProcessesActiveInference022",
      "year": 2025,
      "domain": "🎥",
      "domain_name": "Media & Teaching",
      "type": "Presentation",
      "title": "Systems Processes, Active Inference, and Beyond",
      "venue": "Presentation",
      "url": "https://doi.org/10.5281/zenodo.17138223",
      "doi": "10.5281/zenodo.17138223",
      "docs_path": "papers/2025_SystemsProcesses/",
      "has_paper_folder": true
    },
    {
      "num": 23,
      "citation_key": "Friedman2025TemporalDepthCoherentSelf023",
      "year": 2025,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Temporal Depth in a Coherent Self and in Depersonalization",
      "venue": "Frontiers in Psychology",
      "url": "https://doi.org/10.3389/fpsyg.2025.1585315",
      "doi": "10.3389/fpsyg.2025.1585315",
      "docs_path": "papers/2025_TemporalDepth/",
      "has_paper_folder": true
    },
    {
      "num": 24,
      "citation_key": "Friedman2025ActiveInferenceInstituteActive024",
      "year": 2025,
      "domain": "🌍",
      "domain_name": "AII Ecosystem",
      "type": "Paper",
      "title": "The Active Inference Institute & Active Inference Ecosystem (v3, 2025 snapshot)",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.17982447",
      "doi": "10.5281/zenodo.17982447",
      "docs_path": "papers/2025_AII_v3/",
      "has_paper_folder": true
    },
    {
      "num": 25,
      "citation_key": "Friedman2025AntStack025",
      "year": 2025,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "The Ant Stack",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.16782756",
      "doi": "10.5281/zenodo.16782756",
      "docs_path": "papers/2025_AntStack/",
      "has_paper_folder": true
    },
    {
      "num": 26,
      "citation_key": "Friedman2025DiscoveryEngineAIDriven026",
      "year": 2025,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "The Discovery Engine: AI-Driven Synthesis and Navigation of Scientific Knowledge Landscapes",
      "venue": "ArXiv",
      "url": "https://doi.org/10.48550/arXiv.2505.17500",
      "doi": "10.48550/arXiv.2505.17500",
      "docs_path": "papers/2025_DiscoveryEngine/",
      "has_paper_folder": true
    },
    {
      "num": 27,
      "citation_key": "Friedman2025ThoughtseedsHierarchicalAgenticFramework027",
      "year": 2025,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Thoughtseeds: A Hierarchical and Agentic Framework for Investigating Thought Dynamics in Meditative States",
      "venue": "Entropy",
      "url": "https://doi.org/10.3390/e27050459",
      "doi": "10.3390/e27050459",
      "docs_path": "papers/2025_Thoughtseeds/",
      "has_paper_folder": true
    },
    {
      "num": 28,
      "citation_key": "Friedman2025TowardsScienceConsciousnessSocial028",
      "year": 2025,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "Towards a Science of Consciousness and Social Complexity... For Ants",
      "venue": "Book Chapter",
      "url": "https://www.editorafi.org/ebook/c128-colonias-formigas-conscientes",
      "doi": "",
      "docs_path": "papers/2025_ConsciousnessAnts/",
      "has_paper_folder": true
    },
    {
      "num": 29,
      "citation_key": "Friedman2024AligningActiveInferenceOntology029",
      "year": 2024,
      "domain": "🌍",
      "domain_name": "AII Ecosystem",
      "type": "Paper",
      "title": "Aligning Active Inference Ontology to SUMO",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.11459322",
      "doi": "10.5281/zenodo.11459322",
      "docs_path": "papers/2024_OntologySUMO/",
      "has_paper_folder": true
    },
    {
      "num": 30,
      "citation_key": "Friedman2024BioFirmDevelopmentAtApplied030",
      "year": 2024,
      "domain": "🎥",
      "domain_name": "Media & Teaching",
      "type": "Presentation",
      "title": "BioFirm Development at Applied Active Inference Symposium 2024",
      "venue": "Presentation",
      "url": "https://doi.org/10.5281/zenodo.14861595",
      "doi": "10.5281/zenodo.14861595",
      "docs_path": "papers/2024_BioFirm/",
      "has_paper_folder": true
    },
    {
      "num": 31,
      "citation_key": "Friedman2024BridgingGapsImageMeme031",
      "year": 2024,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Bridging gaps in image meme research: A multidisciplinary paradigm",
      "venue": "JASIST",
      "url": "https://doi.org/10.1002/asi.24900",
      "doi": "10.1002/asi.24900",
      "docs_path": "papers/2024_ImageMemeResearch/",
      "has_paper_folder": true
    },
    {
      "num": 32,
      "citation_key": "Friedman2024ChemicalTranscriptomicDiversityDo032",
      "year": 2024,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "Chemical and transcriptomic diversity do not correlate with ascending levels of social complexity in Blattodea",
      "venue": "Ecology & Evolution",
      "url": "https://doi.org/10.1002/ece3.70063",
      "doi": "10.1002/ece3.70063",
      "docs_path": "papers/2024_BlattodeaDiversity/",
      "has_paper_folder": true
    },
    {
      "num": 33,
      "citation_key": "Friedman2024CommentsNationalDigitalTwins033",
      "year": 2024,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Comments on National Digital Twins R&D Strategic Plan",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.13273681",
      "doi": "10.5281/zenodo.13273681",
      "docs_path": "papers/2024_DigitalTwins/",
      "has_paper_folder": true
    },
    {
      "num": 34,
      "citation_key": "Friedman2024EnhancingPopulationBasedSearch034",
      "year": 2024,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Enhancing Population-based Search with Active Inference",
      "venue": "ArXiv",
      "url": "https://doi.org/10.48550/arXiv.2408.09548",
      "doi": "10.48550/arXiv.2408.09548",
      "docs_path": "papers/2024_PopulationSearch/",
      "has_paper_folder": true
    },
    {
      "num": 35,
      "citation_key": "Friedman2024FarmWorksDecentralizedAIAgents035",
      "year": 2024,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "FarmWorks: Decentralized AI Agents for Personalized Solutions",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.13754585",
      "doi": "10.5281/zenodo.13754585",
      "docs_path": "papers/2024_FarmWorks/",
      "has_paper_folder": true
    },
    {
      "num": 36,
      "citation_key": "Friedman2024FederatedInferenceBeliefSharing036",
      "year": 2024,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Federated inference and belief sharing",
      "venue": "Neuroscience & Biobehavioral Reviews",
      "url": "https://doi.org/10.1016/j.neubiorev.2023.105500",
      "doi": "10.1016/j.neubiorev.2023.105500",
      "docs_path": "papers/2024_FederatedInference/",
      "has_paper_folder": true
    },
    {
      "num": 37,
      "citation_key": "Friedman2024FourFoldFieldsQuantum037",
      "year": 2024,
      "domain": "🎨",
      "domain_name": "Art & Synergetics",
      "type": "Paper",
      "title": "Four-fold Fields of Quantum Dreams",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.10798145",
      "doi": "10.5281/zenodo.10798145",
      "docs_path": "papers/2024_QuantumDreams/",
      "has_paper_folder": true
    },
    {
      "num": 38,
      "citation_key": "Friedman2024MathArtStream8William038",
      "year": 2024,
      "domain": "🎥",
      "domain_name": "Media & Teaching",
      "type": "Presentation",
      "title": "MathArt Stream #8: William Blake and Active Inference",
      "venue": "Presentation",
      "url": "https://doi.org/10.5281/zenodo.13711301",
      "doi": "10.5281/zenodo.13711301",
      "docs_path": "papers/2024_MathArtBlake/",
      "has_paper_folder": true
    },
    {
      "num": 39,
      "citation_key": "Friedman2024SensemakingFederationExploringFrontiers039",
      "year": 2024,
      "domain": "🎥",
      "domain_name": "Media & Teaching",
      "type": "Presentation",
      "title": "Sensemaking Federation: Exploring the Frontiers of Digital Innovation",
      "venue": "Presentation",
      "url": "https://doi.org/10.5281/zenodo.14574046",
      "doi": "10.5281/zenodo.14574046",
      "docs_path": "papers/2024_SensemakingFederation/",
      "has_paper_folder": true
    },
    {
      "num": 40,
      "citation_key": "Friedman2024SharedProtentionsMultiAgent040",
      "year": 2024,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Shared Protentions in Multi-Agent Active Inference",
      "venue": "Entropy",
      "url": "https://doi.org/10.3390/e26040303",
      "doi": "10.3390/e26040303",
      "docs_path": "papers/2024_SharedProtentions/",
      "has_paper_folder": true
    },
    {
      "num": 41,
      "citation_key": "Friedman2024ActiveInferenceInstituteActive041",
      "year": 2024,
      "domain": "🌍",
      "domain_name": "AII Ecosystem",
      "type": "Paper",
      "title": "The Active Inference Institute & Active Inference Ecosystem (v2, 2024 snapshot)",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.14108992",
      "doi": "10.5281/zenodo.14108992",
      "docs_path": "papers/2024_AII_v2/",
      "has_paper_folder": true
    },
    {
      "num": 42,
      "citation_key": "Friedman2024WayFindingInfiniteImaginarium042",
      "year": 2024,
      "domain": "🎨",
      "domain_name": "Art & Synergetics",
      "type": "Paper",
      "title": "Way Finding in the Infinite Imaginarium",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.10601082",
      "doi": "10.5281/zenodo.10601082",
      "docs_path": "papers/2024_InfiniteImaginarium/",
      "has_paper_folder": true
    },
    {
      "num": 43,
      "citation_key": "Friedman2024WhyPaleolithicRockstarsWere043",
      "year": 2024,
      "domain": "🧬",
      "domain_name": "Genetics & Biomedical",
      "type": "Paper",
      "title": "Why Paleolithic Rockstars were both enigmatic and sporadic",
      "venue": "Physics of Life Reviews",
      "url": "https://doi.org/10.1016/j.plrev.2024.04.010",
      "doi": "10.1016/j.plrev.2024.04.010",
      "docs_path": "papers/2024_PaleolithicRockstars/",
      "has_paper_folder": true
    },
    {
      "num": 44,
      "citation_key": "Friedman2024WritingCurioCardsNFT044",
      "year": 2024,
      "domain": "🎨",
      "domain_name": "Art & Synergetics",
      "type": "Paper",
      "title": "Writing on Curio Cards for the \"On NFT\" book",
      "venue": "Taschen",
      "url": "https://www.worldcat.org/isbn/978-3-8365-9970-2",
      "doi": "",
      "docs_path": "papers/2024_CurioCards/",
      "has_paper_folder": true
    },
    {
      "num": 45,
      "citation_key": "Friedman2023GuidedTourThroughSpaces045",
      "year": 2023,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "A guided tour through the spaces of particular \"minds\"",
      "venue": "Physics of Life Reviews",
      "url": "https://doi.org/10.1016/j.plrev.2023.11.001",
      "doi": "10.1016/j.plrev.2023.11.001",
      "docs_path": "papers/2023_GuidedTourMinds/",
      "has_paper_folder": true
    },
    {
      "num": 46,
      "citation_key": "Friedman2023SinglePheromoneModelAccounts046",
      "year": 2023,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "A single-pheromone model accounts for empirical patterns of ant colony foraging",
      "venue": "Cognitive Systems Research",
      "url": "https://doi.org/10.1016/j.cogsys.2023.02.005",
      "doi": "10.1016/j.cogsys.2023.02.005",
      "docs_path": "papers/2023_SinglePheromone/",
      "has_paper_folder": true
    },
    {
      "num": 47,
      "citation_key": "Friedman2023SnapshotPipelineTissueSpecific047",
      "year": 2023,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "A snapshot and pipeline for tissue-specific gene expression meta-analysis in honey bees",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.10400744",
      "doi": "10.5281/zenodo.10400744",
      "docs_path": "papers/2023_HoneyBeeGeneExpression/",
      "has_paper_folder": true
    },
    {
      "num": 48,
      "citation_key": "Friedman2023VariationalSynthesisEvolutionaryDevelopmental048",
      "year": 2023,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "A variational synthesis of evolutionary and developmental dynamics",
      "venue": "Entropy",
      "url": "https://doi.org/10.3390/e25070964",
      "doi": "10.3390/e25070964",
      "docs_path": "papers/2023_VariationalSynthesis/",
      "has_paper_folder": true
    },
    {
      "num": 49,
      "citation_key": "Friedman2023ATLASQuestionOrientedApproach049",
      "year": 2023,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "ATLAS: A Question Oriented Approach to Pattern Languages in Knowledge Management",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.10296601",
      "doi": "10.5281/zenodo.10296601",
      "docs_path": "papers/2023_ATLAS/",
      "has_paper_folder": true
    },
    {
      "num": 50,
      "citation_key": "Friedman2023AccountActiveInferenceModeling050",
      "year": 2023,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "An Account of Active Inference Modeling",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.8415313",
      "doi": "10.5281/zenodo.8415313",
      "docs_path": "papers/2023_AccountActiveInference/",
      "has_paper_folder": true
    },
    {
      "num": 51,
      "citation_key": "Friedman2023CognitiveSovereigntyActiveInference051",
      "year": 2023,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Cognitive Sovereignty & Active Inference in the State of Exception",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.10038232",
      "doi": "10.5281/zenodo.10038232",
      "docs_path": "papers/2023_CognitiveSovereignty/",
      "has_paper_folder": true
    },
    {
      "num": 52,
      "citation_key": "Friedman2023CommentsAIAccountabilityPolicy052",
      "year": 2023,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Comments on AI Accountability Policy to NTIA",
      "venue": "NTIA",
      "url": "https://doi.org/10.5281/zenodo.8025957",
      "doi": "10.5281/zenodo.8025957",
      "docs_path": "papers/2023_AIAccountability/",
      "has_paper_folder": true
    },
    {
      "num": 53,
      "citation_key": "Friedman2023DistributedScienceScientificProcess053",
      "year": 2023,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Distributed Science — The Scientific Process as Multi-Scale Active Inference",
      "venue": "OSF",
      "url": "https://doi.org/10.31219/osf.io/dnw5k",
      "doi": "10.31219/osf.io/dnw5k",
      "docs_path": "papers/2023_DistributedScience/",
      "has_paper_folder": true
    },
    {
      "num": 54,
      "citation_key": "Friedman2023EnhancedNSFPostdoctoralReporting054",
      "year": 2023,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "Enhanced NSF Postdoctoral Reporting via Synthetic Intelligence Language Processing",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.10160656",
      "doi": "10.5281/zenodo.10160656",
      "docs_path": "papers/2023_NSFReporting/",
      "has_paper_folder": true
    },
    {
      "num": 55,
      "citation_key": "Friedman2023ExperimentalEntomologyAgeVideo055",
      "year": 2023,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "Experimental Entomology in the Age of Video",
      "venue": "JoVE",
      "url": "https://doi.org/10.3791/65002",
      "doi": "10.3791/65002",
      "docs_path": "papers/2023_VideoEntomology/",
      "has_paper_folder": true
    },
    {
      "num": 56,
      "citation_key": "Friedman2023GeneralizedNotationNotationActive056",
      "year": 2023,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Generalized Notation Notation for Active Inference Models",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.7803328",
      "doi": "10.5281/zenodo.7803328",
      "docs_path": "papers/2023_GNN/",
      "has_paper_folder": true
    },
    {
      "num": 57,
      "citation_key": "Friedman2023GenerativeResearchTeamsActive057",
      "year": 2023,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Generative Research Teams: Active Inference Compositions for Research and Meta-Science",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.8164667",
      "doi": "10.5281/zenodo.8164667",
      "docs_path": "papers/2023_GenerativeResearchTeams/",
      "has_paper_folder": true
    },
    {
      "num": 58,
      "citation_key": "Friedman2023AntsAging058",
      "year": 2023,
      "domain": "🎥",
      "domain_name": "Media & Teaching",
      "type": "Presentation",
      "title": "Of Ants & Aging",
      "venue": "Presentation",
      "url": "https://doi.org/10.5281/zenodo.7855582",
      "doi": "10.5281/zenodo.7855582",
      "docs_path": "papers/2023_AntsAging/",
      "has_paper_folder": true
    },
    {
      "num": 59,
      "citation_key": "Friedman2023OpenAccessScienceNeeds059",
      "year": 2023,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Open Access science needs Open Science Sensemaking (OSSm)",
      "venue": "MetaArXiv",
      "url": "https://doi.org/10.31222/osf.io/9nb3u",
      "doi": "10.31222/osf.io/9nb3u",
      "docs_path": "papers/2023_OpenScienceSensemaking/",
      "has_paper_folder": true
    },
    {
      "num": 60,
      "citation_key": "Friedman2023PostdocReview20202023060",
      "year": 2023,
      "domain": "🎥",
      "domain_name": "Media & Teaching",
      "type": "Presentation",
      "title": "Postdoc review (2020–2023)",
      "venue": "Presentation",
      "url": "https://doi.org/10.5281/zenodo.8377988",
      "doi": "10.5281/zenodo.8377988",
      "docs_path": "papers/2023_PostdocReview/",
      "has_paper_folder": true
    },
    {
      "num": 61,
      "citation_key": "Friedman2023ActiveInferenceInstituteActive061",
      "year": 2023,
      "domain": "🌍",
      "domain_name": "AII Ecosystem",
      "type": "Paper",
      "title": "The Active Inference Institute and Active Inference Ecosystem (v1)",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.8266281",
      "doi": "10.5281/zenodo.8266281",
      "docs_path": "papers/2023_AII_v1/",
      "has_paper_folder": true
    },
    {
      "num": 62,
      "citation_key": "Friedman2023P3IFPropertiesProcessesPerspectives062",
      "year": 2023,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "The P3IF: Properties, Processes, and Perspectives Inter-Framework",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.10034512",
      "doi": "10.5281/zenodo.10034512",
      "docs_path": "papers/2023_P3IF/",
      "has_paper_folder": true
    },
    {
      "num": 63,
      "citation_key": "Friedman2023CommentOrNotComment063",
      "year": 2023,
      "domain": "🧬",
      "domain_name": "Genetics & Biomedical",
      "type": "Paper",
      "title": "To comment or not to comment",
      "venue": "Physics of Life Reviews",
      "url": "https://doi.org/10.1016/j.plrev.2023.06.002",
      "doi": "10.1016/j.plrev.2023.06.002",
      "docs_path": "papers/2023_ToComment/",
      "has_paper_folder": true
    },
    {
      "num": 64,
      "citation_key": "Friedman2023TranscriptChrisFieldsPhysics064",
      "year": 2023,
      "domain": "🎥",
      "domain_name": "Media & Teaching",
      "type": "Course",
      "title": "Transcript of Chris Fields, \"Physics as Information Processing\" course",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.10447642",
      "doi": "10.5281/zenodo.10447642",
      "docs_path": "",
      "has_paper_folder": false
    },
    {
      "num": 65,
      "citation_key": "Friedman2023WilliamBlakeBuckminsterFuller065",
      "year": 2023,
      "domain": "🎨",
      "domain_name": "Art & Synergetics",
      "type": "Paper",
      "title": "William Blake & Buckminster Fuller: Lives in Juxtaposition",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.7514368",
      "doi": "10.5281/zenodo.7514368",
      "docs_path": "papers/2023_BlakeFuller/",
      "has_paper_folder": true
    },
    {
      "num": 66,
      "citation_key": "Friedman2022ActiveInferenceOntologyDecentralized066",
      "year": 2022,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "An Active Inference Ontology for Decentralized Science",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.6320574",
      "doi": "10.5281/zenodo.6320574",
      "docs_path": "papers/2022_ActiveInferenceOntology/",
      "has_paper_folder": true
    },
    {
      "num": 67,
      "citation_key": "Friedman2022CatechismTowardsActiveDiffusion067",
      "year": 2022,
      "domain": "🌍",
      "domain_name": "AII Ecosystem",
      "type": "Paper",
      "title": "Catechism for Towards Active Diffusion",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.7443848",
      "doi": "10.5281/zenodo.7443848",
      "docs_path": "papers/2022_ActiveDiffusion/",
      "has_paper_folder": true
    },
    {
      "num": 68,
      "citation_key": "Friedman2022FromUsersSenseMakers068",
      "year": 2022,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "From Users to (Sense)Makers: Stigmergic Social Annotation",
      "venue": "Hypertext '22",
      "url": "https://doi.org/10.48550/arXiv.2205.06345",
      "doi": "10.48550/arXiv.2205.06345",
      "docs_path": "papers/2022_StigmergicAnnotation/",
      "has_paper_folder": true
    },
    {
      "num": 69,
      "citation_key": "Friedman2022FreeWillOrLack069",
      "year": 2022,
      "domain": "🧬",
      "domain_name": "Genetics & Biomedical",
      "type": "Paper",
      "title": "On free will or the lack thereof (interview with Robert Sapolsky)",
      "venue": "ALIUS Bulletin",
      "url": "https://doi.org/10.5281/zenodo.7394901",
      "doi": "10.5281/zenodo.7394901",
      "docs_path": "papers/2022_FreeWillSapolsky/",
      "has_paper_folder": true
    },
    {
      "num": 70,
      "citation_key": "Friedman2022PredictiveProcessingInterpretationMirror070",
      "year": 2022,
      "domain": "🎨",
      "domain_name": "Art & Synergetics",
      "type": "Paper",
      "title": "Predictive Processing Interpretation of the Mirror Test",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.7377256",
      "doi": "10.5281/zenodo.7377256",
      "docs_path": "papers/2022_MirrorTest/",
      "has_paper_folder": true
    },
    {
      "num": 71,
      "citation_key": "Friedman2022StructuringInformationCommonsOpen071",
      "year": 2022,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Book",
      "title": "Structuring the Information Commons: Open Standards and Cognitive Security",
      "venue": "COGSEC.org",
      "url": "https://cogsec.org",
      "doi": "",
      "docs_path": "papers/2022_InformationCommons/",
      "has_paper_folder": true
    },
    {
      "num": 72,
      "citation_key": "Friedman2022SystemsModelingCognitiveAudits072",
      "year": 2022,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Systems Modeling and Cognitive Audits for Hypercert Ecosystems",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.7626769",
      "doi": "10.5281/zenodo.7626769",
      "docs_path": "papers/2022_HypercertEcosystems/",
      "has_paper_folder": true
    },
    {
      "num": 73,
      "citation_key": "Friedman2022FreeEnergyPrincipleActive073",
      "year": 2022,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "The Free Energy Principle & Active Inference: a Systematic Literature Analysis",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.7449368",
      "doi": "10.5281/zenodo.7449368",
      "docs_path": "papers/2022_SystematicLiteratureAnalysis/",
      "has_paper_folder": true
    },
    {
      "num": 74,
      "citation_key": "Friedman2022TrustFinderRecommendationsCommunityBased074",
      "year": 2022,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "TrustFinder: Recommendations for Community-Based Trust Systems",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.7093837",
      "doi": "10.5281/zenodo.7093837",
      "docs_path": "papers/2022_TrustFinder/",
      "has_paper_folder": true
    },
    {
      "num": 75,
      "citation_key": "Friedman2021ActiveInferantsActiveInference075",
      "year": 2021,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "Active Inferants: An Active Inference Framework for Ant Colony Behavior",
      "venue": "Frontiers in Behavioral Neuroscience",
      "url": "https://doi.org/10.3389/fnbeh.2021.647732",
      "doi": "10.3389/fnbeh.2021.647732",
      "docs_path": "papers/2021_ActiveInferants/",
      "has_paper_folder": true
    },
    {
      "num": 76,
      "citation_key": "Friedman2021ActiveInferenceModelingConflict076",
      "year": 2021,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Active Inference in Modeling Conflict",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.5759807",
      "doi": "10.5281/zenodo.5759807",
      "docs_path": "papers/2021_ModelingConflict/",
      "has_paper_folder": true
    },
    {
      "num": 77,
      "citation_key": "Friedman2021DigitalRhetoricalEcosystemAnalysis077",
      "year": 2021,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Digital Rhetorical Ecosystem Analysis: Sensemaking of Digital Memetic Discourse",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.5573947",
      "doi": "10.5281/zenodo.5573947",
      "docs_path": "papers/2021_DigitalRhetorical/",
      "has_paper_folder": true
    },
    {
      "num": 78,
      "citation_key": "Friedman2021InnovatorSDigitalPlaybook078",
      "year": 2021,
      "domain": "🎥",
      "domain_name": "Media & Teaching",
      "type": "Playbook",
      "title": "Innovator's Digital Playbook",
      "venue": "Web",
      "url": "https://innovatorsdigitalplaybook.com/",
      "doi": "",
      "docs_path": "",
      "has_paper_folder": false
    },
    {
      "num": 79,
      "citation_key": "Friedman2021NarrativeInformationEcosystemsConflict079",
      "year": 2021,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Book",
      "title": "Narrative Information Ecosystems: Conflict and Trust on the Endless Frontier",
      "venue": "COGSEC.org",
      "url": "https://cogsec.org",
      "doi": "",
      "docs_path": "papers/2021_NarrativeEcosystems/",
      "has_paper_folder": true
    },
    {
      "num": 80,
      "citation_key": "Friedman2021NarrativeInformationManagement080",
      "year": 2021,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Narrative Information Management",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.5573287",
      "doi": "10.5281/zenodo.5573287",
      "docs_path": "papers/2021_NarrativeInformationMgmt/",
      "has_paper_folder": true
    },
    {
      "num": 81,
      "citation_key": "Friedman2021FacilitatorSCatechismPlaybook081",
      "year": 2021,
      "domain": "🎥",
      "domain_name": "Media & Teaching",
      "type": "Playbook",
      "title": "The Facilitator's Catechism Playbook",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.4579414",
      "doi": "10.5281/zenodo.4579414",
      "docs_path": "",
      "has_paper_folder": false
    },
    {
      "num": 82,
      "citation_key": "Friedman2020ActiveInferenceBehaviorEngineering082",
      "year": 2020,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Active Inference & Behavior Engineering for Teams",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.4021163",
      "doi": "10.5281/zenodo.4021163",
      "docs_path": "papers/2020_BehaviorEngineering/",
      "has_paper_folder": true
    },
    {
      "num": 83,
      "citation_key": "Friedman2020CommunicationRemoteTeams083",
      "year": 2020,
      "domain": "🎥",
      "domain_name": "Media & Teaching",
      "type": "Course",
      "title": "Communication for Remote Teams",
      "venue": "Udemy",
      "url": "https://www.udemy.com/course/communication-for-remote-teams/",
      "doi": "",
      "docs_path": "",
      "has_paper_folder": false
    },
    {
      "num": 84,
      "citation_key": "Friedman2020DistributedPhysiologyMolecularBasis084",
      "year": 2020,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "Distributed physiology and the molecular basis of social life in eusocial insects",
      "venue": "Hormones & Behavior",
      "url": "https://doi.org/10.1016/j.yhbeh.2020.104757",
      "doi": "10.1016/j.yhbeh.2020.104757",
      "docs_path": "papers/2020_DistributedPhysiology/",
      "has_paper_folder": true
    },
    {
      "num": 85,
      "citation_key": "Friedman2020EmergentTeamsComplexThreats085",
      "year": 2020,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Emergent Teams for Complex Threats",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.3986085",
      "doi": "10.5281/zenodo.3986085",
      "docs_path": "papers/2020_EmergentTeams/",
      "has_paper_folder": true
    },
    {
      "num": 86,
      "citation_key": "Friedman2020GeneExpressionVariationBrains086",
      "year": 2020,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "Gene expression variation in the brains of harvester ant foragers is associated with collective behavior",
      "venue": "Communications Biology",
      "url": "https://doi.org/10.1038/s42003-020-0813-8",
      "doi": "10.1038/s42003-020-0813-8",
      "docs_path": "papers/2020_GeneExpressionForagers/",
      "has_paper_folder": true
    },
    {
      "num": 87,
      "citation_key": "Friedman2020HowUseKeybaseRemote087",
      "year": 2020,
      "domain": "🎥",
      "domain_name": "Media & Teaching",
      "type": "Course",
      "title": "How to use Keybase for remote teams",
      "venue": "Udemy",
      "url": "https://www.udemy.com/course/keybase-for-remote-teams/",
      "doi": "",
      "docs_path": "",
      "has_paper_folder": false
    },
    {
      "num": 88,
      "citation_key": "Friedman2020MeasurementNaturalVariationNeurotransmitter088",
      "year": 2020,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "Measurement of natural variation of neurotransmitter tissue content in red harvester ant brains",
      "venue": "Analytical & Bioanalytical Chemistry",
      "url": "https://doi.org/10.1007/s00216-019-02355-3",
      "doi": "10.1007/s00216-019-02355-3",
      "docs_path": "papers/2020_NeurotransmitterVariation/",
      "has_paper_folder": true
    },
    {
      "num": 89,
      "citation_key": "Friedman2020GreatPresetRemoteTeams089",
      "year": 2020,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Book",
      "title": "The Great Preset: Remote Teams and Operational Art",
      "venue": "COGSEC.org",
      "url": "https://cogsec.org",
      "doi": "",
      "docs_path": "papers/2020_GreatPreset/",
      "has_paper_folder": true
    },
    {
      "num": 90,
      "citation_key": "Friedman2020InnovatorSCatechism090",
      "year": 2020,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "The Innovator's Catechism",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.4383230",
      "doi": "10.5281/zenodo.4383230",
      "docs_path": "papers/2020_InnovatorsCatechism/",
      "has_paper_folder": true
    },
    {
      "num": 91,
      "citation_key": "Friedman2020NeuroscienceDecisionMakingInterview091",
      "year": 2020,
      "domain": "🧬",
      "domain_name": "Genetics & Biomedical",
      "type": "Paper",
      "title": "The neuroscience of decision making (interview with Timothy Hanks)",
      "venue": "ALIUS Bulletin",
      "url": "https://doi.org/10.34700/8pg4-0h12",
      "doi": "10.34700/8pg4-0h12",
      "docs_path": "papers/2020_NeuroscienceDecision/",
      "has_paper_folder": true
    },
    {
      "num": 92,
      "citation_key": "Friedman2019DennettExplainedInterviewDaniel092",
      "year": 2019,
      "domain": "🧬",
      "domain_name": "Genetics & Biomedical",
      "type": "Paper",
      "title": "Dennett Explained (interview with Daniel Dennett)",
      "venue": "ALIUS Bulletin",
      "url": "https://doi.org/10.34700/7gkw-zh08",
      "doi": "10.34700/7gkw-zh08",
      "docs_path": "papers/2019_DennettExplained/",
      "has_paper_folder": true
    },
    {
      "num": 93,
      "citation_key": "Friedman2019PhDBehavioralPhysiologicalTranscriptomic093",
      "year": 2019,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "PhD: Behavioral, Physiological, and Transcriptomic Variation Among Colonies of Pogonomyrmex barbatus",
      "venue": "Stanford University",
      "url": "http://purl.stanford.edu/pb813wm1484",
      "doi": "",
      "docs_path": "papers/2019_PhDDissertation/",
      "has_paper_folder": true
    },
    {
      "num": 94,
      "citation_key": "Friedman2019AntColonyAsTest094",
      "year": 2019,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "The ant colony as a test for scientific theories of consciousness",
      "venue": "Synthese",
      "url": "https://doi.org/10.1007/s11229-019-02130-y",
      "doi": "10.1007/s11229-019-02130-y",
      "docs_path": "papers/2019_AntConsciousness/",
      "has_paper_folder": true
    },
    {
      "num": 95,
      "citation_key": "Friedman2019PhysiologyForagerHydrationVariation095",
      "year": 2019,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "The physiology of forager hydration and variation among harvester ant colonies",
      "venue": "Scientific Reports",
      "url": "https://doi.org/10.1038/s41598-019-41586-3",
      "doi": "10.1038/s41598-019-41586-3",
      "docs_path": "papers/2019_ForagerHydration/",
      "has_paper_folder": true
    },
    {
      "num": 96,
      "citation_key": "Friedman2018ForagingBehaviorLocomotionInvasive096",
      "year": 2018,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "Foraging behavior and locomotion of the invasive Argentine ant from winter aggregations",
      "venue": "PLoS One",
      "url": "https://doi.org/10.1371/journal.pone.0202117",
      "doi": "10.1371/journal.pone.0202117",
      "docs_path": "papers/2018_ArgentineAnt/",
      "has_paper_folder": true
    },
    {
      "num": 97,
      "citation_key": "Friedman2018MVEEFrameworkEvolutionaryStudies097",
      "year": 2018,
      "domain": "🎥",
      "domain_name": "Media & Teaching",
      "type": "Presentation",
      "title": "MVEE: A Framework for Evolutionary Studies",
      "venue": "Presentation",
      "url": "https://doi.org/10.5281/zenodo.13999298",
      "doi": "10.5281/zenodo.13999298",
      "docs_path": "papers/2018_MVEE/",
      "has_paper_folder": true
    },
    {
      "num": 98,
      "citation_key": "Friedman2018WoodliceMenBayesianAccount098",
      "year": 2018,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Of woodlice and men: A Bayesian account of cognition, life and consciousness (with Karl Friston)",
      "venue": "ALIUS Bulletin",
      "url": "https://doi.org/10.34700/h460-nz89",
      "doi": "10.34700/h460-nz89",
      "docs_path": "papers/2018_WoodliceAndMen/",
      "has_paper_folder": true
    },
    {
      "num": 99,
      "citation_key": "Friedman2018PartnerPenPlayParallel099",
      "year": 2018,
      "domain": "🎨",
      "domain_name": "Art & Synergetics",
      "type": "Paper",
      "title": "Partner Pen Play in Parallel (PPPiP): A New Paradigm for Relationship Improvement",
      "venue": "Arts",
      "url": "https://doi.org/10.3390/arts7030039",
      "doi": "10.3390/arts7030039",
      "docs_path": "papers/2018_PPPiP/",
      "has_paper_folder": true
    },
    {
      "num": 100,
      "citation_key": "Friedman2018RoleDopamineCollectiveRegulation100",
      "year": 2018,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "The Role of Dopamine in Collective Regulation of Foraging in Harvester Ants",
      "venue": "iScience",
      "url": "https://doi.org/10.1016/j.isci.2018.09.001",
      "doi": "10.1016/j.isci.2018.09.001",
      "docs_path": "papers/2018_DopamineForaging/",
      "has_paper_folder": true
    },
    {
      "num": 101,
      "citation_key": "Friedman2017MutAntsAreHere101",
      "year": 2017,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "The MutAnts are here",
      "venue": "Cell",
      "url": "https://doi.org/10.1016/j.cell.2017.07.046",
      "doi": "10.1016/j.cell.2017.07.046",
      "docs_path": "papers/2017_MutAnts/",
      "has_paper_folder": true
    },
    {
      "num": 102,
      "citation_key": "Friedman2017TwoLineagesThatNeed102",
      "year": 2017,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "Two lineages that need each other",
      "venue": "Molecular Ecology",
      "url": "https://doi.org/10.1111/mec.13964",
      "doi": "10.1111/mec.13964",
      "docs_path": "papers/2017_TwoLineages/",
      "has_paper_folder": true
    },
    {
      "num": 103,
      "citation_key": "Friedman2016AntGeneticsReproductivePhysiology103",
      "year": 2016,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "Ant Genetics: Reproductive Physiology, Worker Morphology, and Behavior",
      "venue": "Annual Review of Neuroscience",
      "url": "https://doi.org/10.1146/annurev-neuro-070815-013927",
      "doi": "10.1146/annurev-neuro-070815-013927",
      "docs_path": "papers/2016_AntGenetics/",
      "has_paper_folder": true
    },
    {
      "num": 104,
      "citation_key": "Friedman2016ContextDependentExpressionForaging104",
      "year": 2016,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "Context-dependent expression of the foraging gene in field colonies of ants",
      "venue": "Proceedings of the Royal Society B",
      "url": "https://doi.org/10.1098/rspb.2016.0841",
      "doi": "10.1098/rspb.2016.0841",
      "docs_path": "papers/2016_ForagingGene/",
      "has_paper_folder": true
    },
    {
      "num": 105,
      "citation_key": "Friedman2016InfluenceNuclearStructureFormation105",
      "year": 2016,
      "domain": "🧬",
      "domain_name": "Genetics & Biomedical",
      "type": "Paper",
      "title": "Influence of Nuclear Structure on formation of radiation-induced lethal lesions",
      "venue": "Int. J. Radiation Biology",
      "url": "https://doi.org/10.3109/09553002.2016.1144941",
      "doi": "10.3109/09553002.2016.1144941",
      "docs_path": "papers/2016_NuclearStructure/",
      "has_paper_folder": true
    },
    {
      "num": 106,
      "citation_key": "Friedman2015CommentaryPortugueseCryptoJews106",
      "year": 2015,
      "domain": "🧬",
      "domain_name": "Genetics & Biomedical",
      "type": "Paper",
      "title": "Commentary: Portuguese crypto-Jews: the genetic heritage of a complex history",
      "venue": "Frontiers in Genetics",
      "url": "https://doi.org/10.3389/fgene.2015.00261",
      "doi": "10.3389/fgene.2015.00261",
      "docs_path": "papers/2015_CryptoJews/",
      "has_paper_folder": true
    },
    {
      "num": 107,
      "citation_key": "Friedman2015CouldEhrlichialInfectionCause107",
      "year": 2015,
      "domain": "🧬",
      "domain_name": "Genetics & Biomedical",
      "type": "Paper",
      "title": "Could Ehrlichial Infection Cause Some Changes Associated with Leukemia?",
      "venue": "Medical Hypotheses",
      "url": "https://doi.org/10.1016/j.mehy.2015.09.015",
      "doi": "10.1016/j.mehy.2015.09.015",
      "docs_path": "papers/2015_EhrlichialInfection/",
      "has_paper_folder": true
    },
    {
      "num": 108,
      "citation_key": "Friedman2015LargeScaleCodingSequence108",
      "year": 2015,
      "domain": "🧬",
      "domain_name": "Genetics & Biomedical",
      "type": "Paper",
      "title": "Large Scale Coding Sequence Change Underlies the Evolution of Post-developmental Novelty in Honey Bees",
      "venue": "Molecular Biology & Evolution",
      "url": "https://doi.org/10.1093/molbev/msu292",
      "doi": "10.1093/molbev/msu292",
      "docs_path": "papers/2015_HoneyBeeEvolution/",
      "has_paper_folder": true
    },
    {
      "num": 109,
      "citation_key": "Friedman2026EntoLinguisticsLanguageAmbiguity109",
      "year": 2026,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "Ento-Linguistics: Language, Ambiguity, and Scientific Communication in Entomology",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.19574118",
      "doi": "10.5281/zenodo.19574118",
      "docs_path": "papers/2026_EntoLinguistics/",
      "has_paper_folder": true
    },
    {
      "num": 110,
      "citation_key": "Friedman2026LivingMetaAnalysisArchitecture110",
      "year": 2026,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "A Living Meta-Analysis Architecture for Active Inference: Assertion Extraction, Nanopublications, and Hypothesis Scoring",
      "venue": "Active Inference Journal",
      "url": "https://doi.org/10.5281/zenodo.19897664",
      "doi": "10.5281/zenodo.19897664",
      "docs_path": "papers/2026_ActInfMetaAnalysis/",
      "has_paper_folder": true
    },
    {
      "num": 111,
      "citation_key": "Friedman2026DynamicAttentionalAgentsFocused111",
      "year": 2026,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Dynamic Attentional Agents in Focused Attention Meditation: Hierarchical Computational Modeling of Expert-Novice Differences",
      "venue": "CSCIS vol 2857, Springer",
      "url": "https://doi.org/10.1007/978-3-032-16955-6_11",
      "doi": "10.1007/978-3-032-16955-6_11",
      "docs_path": "papers/2026_FocusedAttentionMeditation/",
      "has_paper_folder": true
    },
    {
      "num": 112,
      "citation_key": "Friedman2026CompositionalApproachesLinguisticCase112",
      "year": 2026,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Compositional Approaches to Linguistic Case for Cognitive Modeling",
      "venue": "Active Inference Journal",
      "url": "https://doi.org/10.5281/zenodo.19695260",
      "doi": "10.5281/zenodo.19695260",
      "docs_path": "papers/2026_CognitiveCaseDiagrams/",
      "has_paper_folder": true
    },
    {
      "num": 113,
      "citation_key": "Friedman2026TowardsLean4Formalization113",
      "year": 2026,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Towards Lean 4 Formalization of the Free Energy Principle: AI-Driven Theorem Sketching and Verification for Active Inference and Bayesian Mechanics",
      "venue": "Active Inference Journal",
      "url": "https://doi.org/10.5281/zenodo.19699234",
      "doi": "10.5281/zenodo.19699234",
      "docs_path": "papers/2026_FEPLean/",
      "has_paper_folder": true
    },
    {
      "num": 114,
      "citation_key": "Friedman2020FacilitatorSCatechism114",
      "year": 2020,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "The Facilitator's Catechism",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.4203765",
      "doi": "10.5281/zenodo.4203765",
      "docs_path": "papers/2020_FacilitatorsCatechism/",
      "has_paper_folder": true
    },
    {
      "num": 115,
      "citation_key": "Friedman2026ArchitectureFalseGodsWilliam115",
      "year": 2026,
      "domain": "🎨",
      "domain_name": "Art & Synergetics",
      "type": "Paper",
      "title": "The Architecture of False Gods: William Blake, Professor Jiang, and the Active Inference Corrective to Single Vision",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.20144984",
      "doi": "10.5281/zenodo.20144984",
      "docs_path": "papers/2026_BlakeJiang/",
      "has_paper_folder": true
    },
    {
      "num": 116,
      "citation_key": "Friedman2026CrescentCityLivingWaves116",
      "year": 2026,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Crescent City in Living Waves: Space, Time, People, and Minds on the Southern Cascadian Coast",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.20286171",
      "doi": "10.5281/zenodo.20286171",
      "docs_path": "papers/2026_CrescentCity/",
      "has_paper_folder": true
    },
    {
      "num": 117,
      "citation_key": "Friedman2026IntroductionBiologyGenerativeApproach117",
      "year": 2026,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Book",
      "title": "Introduction to Biology: A Generative Approach",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.20286478",
      "doi": "10.5281/zenodo.20286478",
      "docs_path": "papers/2026_BiologyTextbook/",
      "has_paper_folder": true
    },
    {
      "num": 118,
      "citation_key": "Friedman2025CEREBRUMCaseEnabledReasoning118",
      "year": 2025,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "CEREBRUM: Case-Enabled Reasoning Engine with Bayesian Representations for Unified Modeling",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.15231156",
      "doi": "10.5281/zenodo.15231156",
      "docs_path": "papers/2025_CEREBRUM2/",
      "has_paper_folder": true
    },
    {
      "num": 119,
      "citation_key": "Friedman2026PolicyEntanglementActiveInference119",
      "year": 2026,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "Policy Entanglement in Active Inference",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.20419637",
      "doi": "10.5281/zenodo.20419637",
      "docs_path": "papers/2026_PolicyEntanglementActive/",
      "has_paper_folder": true
    },
    {
      "num": 120,
      "citation_key": "Friedman2026BoundedAutoResearchTinyReproducible120",
      "year": 2026,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "Bounded AutoResearch for a Tiny Reproducible Machine-Learning Task",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.20420357",
      "doi": "10.5281/zenodo.20420357",
      "docs_path": "papers/2026_BoundedAutoResearchTiny/",
      "has_paper_folder": true
    },
    {
      "num": 121,
      "citation_key": "Friedman2026ConvergenceAnalysisGradientDescent121",
      "year": 2026,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "Convergence Analysis of Gradient Descent Optimization",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.20420368",
      "doi": "10.5281/zenodo.20420368",
      "docs_path": "papers/2026_ConvergenceAnalysisGradient/",
      "has_paper_folder": true
    },
    {
      "num": 122,
      "citation_key": "Friedman2026EditorialQualityAtScale122",
      "year": 2026,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "Editorial Quality at Scale: A Reproducible Prose-Review Pipeline",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.20420342",
      "doi": "10.5281/zenodo.20420342",
      "docs_path": "papers/2026_EditorialQualityAt/",
      "has_paper_folder": true
    },
    {
      "num": 123,
      "citation_key": "Friedman2026TemplateApproachReproducibleGenerative123",
      "year": 2026,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "A template/ approach to Reproducible Generative Research",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.20420387",
      "doi": "10.5281/zenodo.20420387",
      "docs_path": "papers/2026_TemplateApproachReproducible/",
      "has_paper_folder": true
    },
    {
      "num": 124,
      "citation_key": "Friedman2026ActiveInferenceMultiTrack124",
      "year": 2026,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "Active Inference Multi-Track Exemplar",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.20420352",
      "doi": "10.5281/zenodo.20420352",
      "docs_path": "papers/2026_ActiveInferenceMulti/",
      "has_paper_folder": true
    },
    {
      "num": 125,
      "citation_key": "Friedman2026BeeStackEvidenceTypedScaffold125",
      "year": 2026,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "BeeStack: An Evidence-Typed Scaffold for Whole-Colony Honeybee Simulation",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.20420557",
      "doi": "10.5281/zenodo.20420557",
      "docs_path": "papers/2026_BeeStack/",
      "has_paper_folder": true
    },
    {
      "num": 126,
      "citation_key": "Friedman2026WhenDoBugsSee126",
      "year": 2026,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "When do bugs see (infra)red?",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.20450970",
      "doi": "10.5281/zenodo.20450970",
      "docs_path": "papers/2026_WhenDoBugs/",
      "has_paper_folder": true
    },
    {
      "num": 127,
      "citation_key": "Friedman2026SelfImprovementAgentHarness127",
      "year": 2026,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "Self-Improvement Agent Harness: A Deterministic SIA Exemplar",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.20453880",
      "doi": "10.5281/zenodo.20453880",
      "docs_path": "papers/2026_SelfImprovementAgent/",
      "has_paper_folder": true
    },
    {
      "num": 128,
      "citation_key": "Friedman2025BiofirmDevelopmentFirstPrinciples128",
      "year": 2025,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Presentation",
      "title": "Biofirm Development with First Principles First and the Active Inference Institute at the Applied Active Inference Symposium 2024",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.14861596",
      "doi": "10.5281/zenodo.14861596",
      "docs_path": "papers/2025_BiofirmDevelopmentWith/",
      "has_paper_folder": true
    },
    {
      "num": 129,
      "citation_key": "Friedman2025ConCatEnateEmulation129",
      "year": 2025,
      "domain": "🧬",
      "domain_name": "Genetics & Biomedical",
      "type": "Paper",
      "title": "Con-cat-enate: emulation of Cat Hippocampus",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.14738798",
      "doi": "10.5281/zenodo.14738798",
      "docs_path": "papers/2025_ConCatEnate/",
      "has_paper_folder": true
    },
    {
      "num": 130,
      "citation_key": "Friedman2025GraphspeakLanguageHandshake130",
      "year": 2025,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Graphspeak: of language and handshake",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.14737157",
      "doi": "10.5281/zenodo.14737157",
      "docs_path": "papers/2025_Graphspeak/",
      "has_paper_folder": true
    },
    {
      "num": 131,
      "citation_key": "Friedman2025BevCycPositPrimitiveDrivers131",
      "year": 2025,
      "domain": "🧬",
      "domain_name": "Genetics & Biomedical",
      "type": "Paper",
      "title": "BevCyc - posit on primitive drivers of creatures",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.14737076",
      "doi": "10.5281/zenodo.14737076",
      "docs_path": "papers/2025_BevCycPositPrimitive/",
      "has_paper_folder": true
    },
    {
      "num": 132,
      "citation_key": "Friedman2025BeaconsPreEmulationSocial132",
      "year": 2025,
      "domain": "🧬",
      "domain_name": "Genetics & Biomedical",
      "type": "Paper",
      "title": "Beacons - pre emulation of social cortex",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.14737060",
      "doi": "10.5281/zenodo.14737060",
      "docs_path": "papers/2025_BeaconsPreEmulation/",
      "has_paper_folder": true
    },
    {
      "num": 133,
      "citation_key": "Friedman2025ConCatEnatePilot133",
      "year": 2025,
      "domain": "🧬",
      "domain_name": "Genetics & Biomedical",
      "type": "Paper",
      "title": "Con-cat-enate: pilot overview",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.14737043",
      "doi": "10.5281/zenodo.14737043",
      "docs_path": "papers/2025_ConCatEnate2/",
      "has_paper_folder": true
    },
    {
      "num": 134,
      "citation_key": "Friedman2024PushPullPrimingSequence134",
      "year": 2024,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Push and Pull: A priming sequence",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.10659375",
      "doi": "10.5281/zenodo.10659375",
      "docs_path": "papers/2024_PushPull/",
      "has_paper_folder": true
    },
    {
      "num": 135,
      "citation_key": "Friedman2023NaturalAIBasedScience135",
      "year": 2023,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "A Natural AI Based on The Science of Computational Physics, Biology and Neuroscience: Policy and Societal Significance",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.10360148",
      "doi": "10.5281/zenodo.10360148",
      "docs_path": "papers/2023_NaturalAIBased/",
      "has_paper_folder": true
    },
    {
      "num": 136,
      "citation_key": "Friedman2023ATLASQuestionOrientedApproach136",
      "year": 2023,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "ATLAS: A Question Oriented Approach to the Use of Pattern Languages in Knowledge Management",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.10362561",
      "doi": "10.5281/zenodo.10362561",
      "docs_path": "papers/2023_ATLAS2/",
      "has_paper_folder": true
    },
    {
      "num": 137,
      "citation_key": "Friedman2023TranscriptActiveInferenceGuestStream137",
      "year": 2023,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Transcript of Active Inference GuestStream 049.1: \"Clickbait, consciousness science, and responsible journalism\"",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.8229512",
      "doi": "10.5281/zenodo.8229512",
      "docs_path": "papers/2023_TranscriptActiveInference/",
      "has_paper_folder": true
    },
    {
      "num": 138,
      "citation_key": "Friedman2023ModernNostrIndexCard138",
      "year": 2023,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Modern Nostr Index Card-based Knowledge Engineering",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.8118156",
      "doi": "10.5281/zenodo.8118156",
      "docs_path": "papers/2023_ModernNostrIndex/",
      "has_paper_folder": true
    },
    {
      "num": 139,
      "citation_key": "Friedman2023SlidesIris139",
      "year": 2023,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Slides for Iris",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.7838653",
      "doi": "10.5281/zenodo.7838653",
      "docs_path": "papers/2023_SlidesIris/",
      "has_paper_folder": true
    },
    {
      "num": 140,
      "citation_key": "Friedman2022CanonicalNeuralNetworksPerform140",
      "year": 2022,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Canonical neural networks perform active inference",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.7400536",
      "doi": "10.5281/zenodo.7400536",
      "docs_path": "papers/2022_CanonicalNeuralNetworks/",
      "has_paper_folder": true
    },
    {
      "num": 141,
      "citation_key": "Friedman2022InteroceptionAsModelingAllostasis141",
      "year": 2022,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Interoception as modeling, allostasis as control",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.7400709",
      "doi": "10.5281/zenodo.7400709",
      "docs_path": "papers/2022_InteroceptionAsModeling/",
      "has_paper_folder": true
    },
    {
      "num": 142,
      "citation_key": "Friedman2022TranscriptMarkSolmsConsciousness142",
      "year": 2022,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Transcript of: Mark Solms, \"Consciousness as Precision Optimization: Some Physiological and Philosophical Considerations\", ActInf GuestStream #016",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.7267947",
      "doi": "10.5281/zenodo.7267947",
      "docs_path": "papers/2022_Transcript/",
      "has_paper_folder": true
    },
    {
      "num": 143,
      "citation_key": "Friedman2022WorkedExampleBayesianMechanics143",
      "year": 2022,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "A Worked Example of the Bayesian Mechanics of Classical Objects",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.7400786",
      "doi": "10.5281/zenodo.7400786",
      "docs_path": "papers/2022_WorkedExampleBayesian/",
      "has_paper_folder": true
    },
    {
      "num": 144,
      "citation_key": "Friedman2022TranscriptDiscussionsCommunicationAs144",
      "year": 2022,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Transcript of discussions on: \"Communication as Socially Extended Active Inference: An Ecological Approach to Communicative Behavior\"",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.7401875",
      "doi": "10.5281/zenodo.7401875",
      "docs_path": "papers/2022_TranscriptDiscussions/",
      "has_paper_folder": true
    },
    {
      "num": 145,
      "citation_key": "Friedman2022TrackingPublicSensemakingThrough145",
      "year": 2022,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Tracking Public Sensemaking through Rhetorical Annotation of Image Memes",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.6904427",
      "doi": "10.5281/zenodo.6904427",
      "docs_path": "papers/2022_TrackingPublicSensemaking/",
      "has_paper_folder": true
    },
    {
      "num": 146,
      "citation_key": "Friedman2021TranscriptKarlFriston1st146",
      "year": 2021,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Transcript of: Karl Friston, 1st Applied Active Inference Symposium, Active Inference Lab, June 21, 2021",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.5797072",
      "doi": "10.5281/zenodo.5797072",
      "docs_path": "papers/2021_Transcript/",
      "has_paper_folder": true
    },
    {
      "num": 147,
      "citation_key": "Friedman2021CollaborativeWritingCatechismBased147",
      "year": 2021,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Collaborative Writing for Catechism-Based Teams",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.4633921",
      "doi": "10.5281/zenodo.4633921",
      "docs_path": "papers/2021_CollaborativeWritingCatechism/",
      "has_paper_folder": true
    },
    {
      "num": 148,
      "citation_key": "Friedman2020ReimaginingMaps148",
      "year": 2020,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Reimagining Maps",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.4170026",
      "doi": "10.5281/zenodo.4170026",
      "docs_path": "papers/2020_ReimaginingMaps/",
      "has_paper_folder": true
    },
    {
      "num": 149,
      "citation_key": "Friedman2020InfiniteGamesInfiniteTeams149",
      "year": 2020,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Infinite Games for Infinite Teams",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.12601675",
      "doi": "10.5281/zenodo.12601675",
      "docs_path": "papers/2020_InfiniteGamesInfinite/",
      "has_paper_folder": true
    },
    {
      "num": 150,
      "citation_key": "Friedman2026MusicNeverStoppedGrateful150",
      "year": 2026,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "The Music Never Stopped: A Grateful Data Compendium with a Category-Theoretic Interpretation",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.20482026",
      "doi": "10.5281/zenodo.20482026",
      "docs_path": "papers/2026_MusicNeverStopped/",
      "has_paper_folder": true
    },
    {
      "num": 151,
      "citation_key": "Friedman2026DeterministicTestbedSelfOrganizing151",
      "year": 2026,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "A Deterministic Testbed for Self-Organizing Agent-Team Coordination",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.20533670",
      "doi": "10.5281/zenodo.20533670",
      "docs_path": "papers/2026_DeterministicTestbedSelf/",
      "has_paper_folder": true
    },
    {
      "num": 152,
      "citation_key": "Friedman2026RecoveringLLMPersonaAccuracies152",
      "year": 2026,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "Recovering LLM-Persona Accuracies from Unlabeled Votes",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.20498700",
      "doi": "10.5281/zenodo.20498700",
      "docs_path": "papers/2026_RecoveringLLMPersona/",
      "has_paper_folder": true
    },
    {
      "num": 153,
      "citation_key": "Friedman2026TriplicateDataDrivenLarge153",
      "year": 2026,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "The Triplicate: A Data-Driven Large-Format Newspaper Layout Engine",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.20533676",
      "doi": "10.5281/zenodo.20533676",
      "docs_path": "papers/2026_Triplicate/",
      "has_paper_folder": true
    },
    {
      "num": 154,
      "citation_key": "Friedman2026TemplateTextbook154",
      "year": 2026,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Book",
      "title": "The Template Textbook",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.20533126",
      "doi": "10.5281/zenodo.20533126",
      "docs_path": "papers/2026_TemplateTextbook/",
      "has_paper_folder": true
    },
    {
      "num": 155,
      "citation_key": "Friedman2016LessonsFromColony155",
      "year": 2016,
      "domain": "🐜",
      "domain_name": "Entomology",
      "type": "Paper",
      "title": "Lessons from the colony",
      "venue": "Science",
      "url": "https://www.science.org/doi/10.1126/science.352.6288.886",
      "doi": "",
      "docs_path": "",
      "has_paper_folder": false
    },
    {
      "num": 156,
      "citation_key": "Friedman2016FullSpeedAheadCity156",
      "year": 2016,
      "domain": "🌍",
      "domain_name": "AII Ecosystem",
      "type": "Paper",
      "title": "Full speed ahead to the City on the Hill",
      "venue": "Science",
      "url": "https://doi.org/10.1126/science.352.6288.886",
      "doi": "10.1126/science.352.6288.886",
      "docs_path": "",
      "has_paper_folder": false
    },
    {
      "num": 157,
      "citation_key": "Friedman2021Disinforge157",
      "year": 2021,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Disinforge",
      "venue": "Science",
      "url": "https://www.science.org/doi/10.1126/science.371.6524.22",
      "doi": "",
      "docs_path": "",
      "has_paper_folder": false
    },
    {
      "num": 158,
      "citation_key": "Friedman2021DefiningEvents2020Hindsight158",
      "year": 2021,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Defining events: 2020 in hindsight",
      "venue": "Science",
      "url": "https://doi.org/10.1126/science.371.6524.22",
      "doi": "10.1126/science.371.6524.22",
      "docs_path": "",
      "has_paper_folder": false
    },
    {
      "num": 159,
      "citation_key": "Friedman2022ActiveBlockferenceCadCADActive159",
      "year": 2022,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "Active Blockference: cadCAD with Active Inference for Cognitive Systems Modeling",
      "venue": "International Workshop on Active Inference",
      "url": "https://doi.org/10.1007/978-3-031-28719-0_10",
      "doi": "10.1007/978-3-031-28719-0_10",
      "docs_path": "",
      "has_paper_folder": false
    },
    {
      "num": 160,
      "citation_key": "Friedman2024FromNeuronalPacketsThoughtseeds160",
      "year": 2024,
      "domain": "🧠",
      "domain_name": "Active Inference",
      "type": "Paper",
      "title": "From Neuronal Packets to Thoughtseeds: A Hierarchical Model of Embodied Cognition in the Global Workspace",
      "venue": "arXiv",
      "url": "https://doi.org/10.48550/arXiv.2408.15982",
      "doi": "10.48550/arXiv.2408.15982",
      "docs_path": "",
      "has_paper_folder": false
    },
    {
      "num": 161,
      "citation_key": "Friedman2021KnowledgeManagementArchipelago161",
      "year": 2021,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Knowledge Management Archipelago",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.5034809",
      "doi": "10.5281/zenodo.5034809",
      "docs_path": "",
      "has_paper_folder": false
    },
    {
      "num": 162,
      "citation_key": "Friedman2024CommentsSubmittedByBlockScience162",
      "year": 2024,
      "domain": "🛡️",
      "domain_name": "Cognitive Security",
      "type": "Paper",
      "title": "Comments Submitted by BlockScience, UW APL IRSIRI, and the Cognitive Security and Education Forum",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.13273682",
      "doi": "10.5281/zenodo.13273682",
      "docs_path": "",
      "has_paper_folder": false
    },
    {
      "num": 163,
      "citation_key": "Friedman2017OsteopathyVariableVariabilityHealth163",
      "year": 2017,
      "domain": "🧬",
      "domain_name": "Genetics & Biomedical",
      "type": "Paper",
      "title": "Osteopathy and the Variable Variability of Health",
      "venue": "The Cranial Letter 70(4)",
      "url": "",
      "doi": "",
      "docs_path": "",
      "has_paper_folder": false
    },
    {
      "num": 164,
      "citation_key": "Friedman2016CellsMechanobiologyOsteopathy164",
      "year": 2016,
      "domain": "🧬",
      "domain_name": "Genetics & Biomedical",
      "type": "Paper",
      "title": "Cells, Mechanobiology, and Osteopathy",
      "venue": "The Cranial Letter 69(1)",
      "url": "",
      "doi": "",
      "docs_path": "",
      "has_paper_folder": false
    },
    {
      "num": 165,
      "citation_key": "Friedman2026ITraceVerificationFirstWebcam165",
      "year": 2026,
      "domain": "💻",
      "domain_name": "Computational",
      "type": "Paper",
      "title": "iTrace: verification-first webcam eye-movement analysis",
      "venue": "Zenodo",
      "url": "https://doi.org/10.5281/zenodo.20614909",
      "doi": "10.5281/zenodo.20614909",
      "docs_path": "papers/2026_ITrace/",
      "has_paper_folder": true
    }
  ]
}